Factsheet for TraesCS1B01G019600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G018800.1	Wheat	cytosol	83.13	87.9
TraesCS1A01G015500.1	Wheat	cytosol	89.16	78.1
TraesCS1D01G013400.1	Wheat	cytosol	86.75	75.39
TraesCS1B01G019700.1	Wheat	mitochondrion	70.48	64.64
TraesCS2B01G040000.1	Wheat	cytosol	71.39	64.23
TraesCS4B01G048500.1	Wheat	mitochondrion	69.88	64.09
TraesCS1B01G018700.1	Wheat	peroxisome	69.28	63.54
TraesCS1B01G019800.1	Wheat	mitochondrion	66.87	61.33
GSMUA_Achr2P20800_001	Banana	mitochondrion	65.66	59.73
GSMUA_Achr2P20790_001	Banana	mitochondrion	52.71	57.95
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	49.7	57.89
TraesCS7B01G079500.1	Wheat	mitochondrion	62.35	56.25
TraesCS6B01G353200.2	Wheat	plastid	60.54	54.32
TraesCS2B01G328100.1	Wheat	plastid	59.94	54.08
TraesCS1B01G231000.2	Wheat	peroxisome, plastid	47.29	53.77
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	58.73	52.42
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	58.73	52.14
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.53	51.07
TraesCS7B01G455400.1	Wheat	cytosol	51.51	50.29
TraesCS2B01G328200.1	Wheat	cytosol	56.02	50.27
TraesCS4B01G356100.1	Wheat	cytosol	59.04	50.13
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	56.93	49.74
KRH51591	Soybean	cytosol	55.72	49.33
TraesCS7B01G455300.1	Wheat	mitochondrion	50.9	49.27
KRH05151	Soybean	nucleus	51.51	48.58
KRH17523	Soybean	cytosol	55.72	47.07
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	50.0	42.56
TraesCS5B01G487600.1	Wheat	mitochondrion	47.89	41.73
KRH06010	Soybean	mitochondrion	18.67	35.23

Protein Annotations

EnsemblPlants:TraesCS1B01G019600.1	EnsemblPlantsGene:TraesCS1B01G019600	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1B:-:9260224..9261405

Molecular Weight (calculated)

36581.2 Da

IEP (calculated)

8.005

GRAVY (calculated)

-0.426

Length

332 amino acids

Sequence
(BLAST)

001: MTRQRSPGTS RSRTPPSTTR NAPRPATGVS AAAQGHRPTP GVWTDEQAEA WRPVVDAVHA KGAVIFCQLW HVGRVVGKLR PDGTPQPVSS TGRPIATPRV
101: NNGFEEEFAT PKRLDVAEIA GVVDDFRRAA RNAVDAGFDG VEIHGAHGYL IEQFLKDSAN DREDEYGSSL ENWCRFALEV VTAVADEIGG RRVGVRLSPF
201: ADYMDCHDSD PHALALHMAT KLNGVPCGIL YLHMVEPRMA RADGRRVVPK RLRPYREAFK GTFIAVGGYD REEGNKVVGE GYADLVAFGR LFLANPDLPK
301: RFKLDAELNK YNRATFYTSD PIVGYTDYPF LG

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.