Factsheet for TraesCS1B01G018800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G019600.1	Wheat	mitochondrion	87.9	83.13
TraesCS1A01G015500.1	Wheat	cytosol	92.68	76.78
TraesCS4B01G048500.1	Wheat	mitochondrion	71.66	62.15
TraesCS2B01G040000.1	Wheat	cytosol	72.93	62.06
TraesCS1B01G018700.1	Wheat	peroxisome	71.34	61.88
TraesCS1B01G019700.1	Wheat	mitochondrion	71.34	61.88
GSMUA_Achr2P20800_001	Banana	mitochondrion	69.11	59.45
TraesCS1B01G019800.1	Wheat	mitochondrion	68.47	59.39
GSMUA_Achr2P20790_001	Banana	mitochondrion	55.41	57.62
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	51.91	57.19
TraesCS7B01G079500.1	Wheat	mitochondrion	65.29	55.71
TraesCS6B01G353200.2	Wheat	plastid	63.38	53.78
TraesCS2B01G328100.1	Wheat	plastid	62.1	52.99
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	61.78	51.87
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	61.15	51.61
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.51	50.8
KRH51591	Soybean	cytosol	60.19	50.4
TraesCS1B01G231000.2	Wheat	peroxisome, plastid	46.82	50.34
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	59.24	48.95
TraesCS7B01G455400.1	Wheat	cytosol	52.87	48.82
TraesCS2B01G328200.1	Wheat	cytosol	57.32	48.65
TraesCS4B01G356100.1	Wheat	cytosol	60.19	48.34
KRH05151	Soybean	nucleus	54.14	48.3
TraesCS7B01G455300.1	Wheat	mitochondrion	52.23	47.81
KRH17523	Soybean	cytosol	58.6	46.82
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	50.96	41.03
TraesCS5B01G487600.1	Wheat	mitochondrion	49.04	40.42
KRH06010	Soybean	mitochondrion	19.43	34.66

Protein Annotations

EnsemblPlants:TraesCS1B01G018800.1	EnsemblPlantsGene:TraesCS1B01G018800	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:	:

Description

No Description!

Coordinates

chr1B:+:8917761..8918856

Molecular Weight (calculated)

34496.9 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.242

Length

314 amino acids

Sequence
(BLAST)

001: MLITEATGVS AAAQGHRPTP GVWTDEQVEA WRPIVDAVHT KGAVIFCQLW HVGRVVGALR PDGTRAETVP VSSTGRPIAT PRMNDGVEEE FATPRRLAVE
101: EIAGVLDDFR RAARNAVYAG FDGVEIHGAH GYLVEQFLKD STNDRDEEYG GSLENRCRFV LEVVTAVADE IGGRRVGVRL SPFADYMDCH DSDPHALALL
201: MATKLNNVPG GILYLHMVEP RMARANGRRV VPKRLRPYRE AFGGTFIAAG GYDREGNKVV GEGYADLVAF GRLFLANPGL PKRFELDAEL NKYNRATFYT
301: SDPVVGYTDY PFLG

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.