Factsheet for TraesCS1B01G231000.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G217700.1	Wheat	peroxisome	90.75	73.41
TraesCS1D01G219500.1	Wheat	peroxisome	91.44	72.95
TraesCS1B01G018700.1	Wheat	peroxisome	76.37	61.6
TraesCS1B01G019700.1	Wheat	mitochondrion	76.37	61.6
TraesCS4B01G048500.1	Wheat	mitochondrion	75.0	60.5
TraesCS1B01G019800.1	Wheat	mitochondrion	72.95	58.84
TraesCS2B01G040000.1	Wheat	cytosol	72.95	57.72
GSMUA_Achr2P20800_001	Banana	mitochondrion	70.21	56.16
GSMUA_Achr2P20790_001	Banana	mitochondrion	55.82	53.97
TraesCS7B01G079500.1	Wheat	mitochondrion	66.78	52.99
TraesCS6B01G353200.2	Wheat	plastid	66.1	52.16
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	64.04	50.27
TraesCS2B01G328100.1	Wheat	plastid	61.64	48.91
TraesCS1B01G019600.1	Wheat	mitochondrion	53.77	47.29
TraesCS1B01G018800.1	Wheat	cytosol	50.34	46.82
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	60.27	46.32
TraesCS4B01G356100.1	Wheat	cytosol	61.64	46.04
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	57.88	45.19
KRH51591	Soybean	cytosol	57.88	45.07
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.19	44.65
TraesCS7B01G455400.1	Wheat	cytosol	51.37	44.12
KRH05151	Soybean	nucleus	52.74	43.75
KRH17523	Soybean	cytosol	58.56	43.51
TraesCS2B01G328200.1	Wheat	cytosol	53.77	42.43
TraesCS7B01G455300.1	Wheat	mitochondrion	49.66	42.27
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	39.73	40.7
TraesCS5B01G487600.1	Wheat	mitochondrion	49.66	38.06
TraesCS7B01G311600.1	Wheat	mitochondrion, peroxisome	48.63	36.41
KRH06010	Soybean	mitochondrion	12.33	20.45

Protein Annotations

EnsemblPlants:TraesCS1B01G231000.2	EnsemblPlantsGene:TraesCS1B01G231000	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr1B:+:414806237..414807655

Molecular Weight (calculated)

32243.1 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.401

Length

292 amino acids

Sequence
(BLAST)

001: MESTPAPPLL TPHKMGQFDL SHRHCNQPAQ FPFMPSVVLA PLTRQRSYGN VPQPHARVYY AQRATKGGLL IAEATGVSDT AQGYKDAPGV WTEEQVDAWK
101: PVVDAVHAKG ALFFCQIWHA GRVSNYKLQP NGQAPISSTD KQVSPQMSAD GRLEEFAPPR SLAKDEIPNV VDDFRKAARN AIAAGFDGVE IHGAYSYIID
201: QFLKDSANDR TDEYGGSLDN RCRFALEVVD AVVGEVGGHR VGIRLSPFTD YMDCHDSDPQ ALALHLVNKL NDYGILYCHM IEPRMAHVDG RR

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.