Factsheet for TraesCS4D01G349500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G525300.1	Wheat	mitochondrion	92.62	92.88
HORVU4Hr1G086050.2	Barley	cytosol, peroxisome, plastid	91.26	90.76
TraesCS4B01G356100.1	Wheat	cytosol	95.08	89.0
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	75.96	74.73
EES15864	Sorghum	peroxisome	74.04	72.65
GSMUA_Achr2P20790_001	Banana	mitochondrion	58.47	70.86
GSMUA_Achr2P20800_001	Banana	mitochondrion	69.95	70.14
TraesCS2D01G028600.1	Wheat	peroxisome	62.02	68.79
TraesCS1D01G013500.1	Wheat	cytosol	66.12	66.85
TraesCS1D01G013700.1	Wheat	mitochondrion	66.12	66.85
TraesCS1D01G013600.1	Wheat	cytosol	65.85	66.57
TraesCS1D01G219500.1	Wheat	peroxisome	66.39	66.39
TraesCS1D01G013000.1	Wheat	mitochondrion	65.3	66.02
TraesCS7D01G176000.1	Wheat	cytosol	40.98	64.66
TraesCS6D01G302300.2	Wheat	plastid	65.3	64.59
TraesCS7D01G175800.1	Wheat	mitochondrion	52.46	64.21
TraesCS2D01G309400.1	Wheat	plastid	63.93	63.24
TraesCS7D01G175700.2	Wheat	mitochondrion	23.77	61.7
KRH51591	Soybean	cytosol	62.02	60.53
TraesCS1D01G013400.1	Wheat	cytosol	62.57	59.95
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	61.2	59.89
TraesCS7D01G175900.2	Wheat	cytosol	65.85	59.07
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.11	58.82
TraesCS2D01G309500.1	Wheat	golgi	59.29	58.65
TraesCS7D01G524400.1	Wheat	mitochondrion, peroxisome, plastid	54.37	58.02
TraesCS7D01G524600.1	Wheat	peroxisome	53.28	57.02
KRH05151	Soybean	nucleus	54.64	56.82
KRH17523	Soybean	cytosol	60.11	55.98
TraesCS7D01G175600.1	Wheat	mitochondrion	41.53	55.07
TraesCS7D01G405500.1	Wheat	golgi	56.01	52.56
KRH06010	Soybean	mitochondrion	19.95	41.48

Protein Annotations

EnsemblPlants:TraesCS4D01G349500.1	EnsemblPlantsGene:TraesCS4D01G349500	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114
InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF72	PFAM:PF00724
SEG:seg	SUPFAM:SSF51395	TIGR:cd02933	MapMan:50.1.3	:	:

Description

No Description!

Coordinates

chr4D:+:502488723..502490099

Molecular Weight (calculated)

40606.2 Da

IEP (calculated)

5.591

GRAVY (calculated)

-0.240

Length

366 amino acids

Sequence
(BLAST)

001: METKTTTPLL TPYKMGDFNL AHRVVLAPLT RCRSYGNIAQ PHNALYYAQR AAPGVLLIAE ACAVSEAARG YPHVPGLWSQ EQVEAWRPVV DAVHAKGAVF
101: FCQLWHTGRV SPTEFQPNGQ APVSSTDKQV PPEVAHDGSV LEFAPPRRLE TEEIPHIVND FRVAARNAMR AGFDGVEIHA GNGYLIDQFM KDGVNDRTDE
201: YGGGLDNRCR FAAEVIAAVC HEAGAGRVGV RLSPFADYVD CVDSDPEALA LHVMGVMNGL GVLYCHMIEP RMCVNEWMIP RRLLPFRKAF KGTFMVNGGY
301: DREEGDKAVA EGYADLVAYG RLFLANPDLP ERFRRNAVLN KYDRSTFYTS DPVVGYTDYP FLETED

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.