CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	89.28	89.52
TraesCS5A01G525300.1	Wheat	mitochondrion	73.99	75.62
HORVU4Hr1G086050.2	Barley	cytosol, peroxisome, plastid	73.46	74.46
TraesCS4D01G349500.1	Wheat	cytosol	72.65	74.04
TraesCS4B01G356100.1	Wheat	cytosol	73.73	70.33
GSMUA_Achr2P20790_001	Banana	mitochondrion	56.57	69.87
GSMUA_Achr2P20800_001	Banana	mitochondrion	65.68	67.12
KXG21012	Sorghum	cytosol	64.61	65.85
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	67.83	65.71
EER89417	Sorghum	peroxisome	65.42	65.59
EER89419	Sorghum	mitochondrion, peroxisome, plastid	67.02	64.94
KXG26381	Sorghum	plastid	59.25	64.43
EER88073	Sorghum	cytosol	64.34	63.66
KXG30433	Sorghum	mitochondrion, plastid	61.66	62.67
KXG26383	Sorghum	plastid	63.0	62.67
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	60.86	61.35
EER89418	Sorghum	cytosol	61.93	61.27
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	59.25	59.09
KRH51591	Soybean	cytosol	58.71	58.4
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.37	57.22
KRH05151	Soybean	nucleus	53.62	56.82
EES12232	Sorghum	mitochondrion	57.37	56.46
KRH17523	Soybean	cytosol	57.91	54.96
OQU79576	Sorghum	plastid	22.52	54.55
EES13971	Sorghum	peroxisome, plastid	53.62	49.75
KRH06010	Soybean	mitochondrion	18.23	38.64

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:8084222	InterPro:Aldolase_TIM	UniProt:C5YTU9	EnsemblPlants:EES15864
ProteinID:EES15864	ProteinID:EES15864.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF44	EnsemblPlantsGene:SORBI_3008G079600	SUPFAM:SSF51395	UniParc:UPI0001A880F5	RefSeq:XP_002442026.1	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:12891733..12913069

Molecular Weight (calculated)

41174.7 Da

IEP (calculated)

5.575

GRAVY (calculated)

-0.247

Length

373 amino acids

Sequence
(BLAST)

001: MEMESTTLPL LTPYKMGEFN LAHRVVLAPL TRCRAYGNVP QPEHMAVYYC QRATPGGLLI AEACAVSESA RGYPDVPGLW TDQQVEAWKP IVDAVHASGA
101: VFFAQIWHTG RASAPEFQPN GQAPISSTDK QIPPQVSHAG VVNTFAVPRR PETEEIPHVV NDFRIAARNA IKAGFDGVEI HAANGYLFDQ FMKDSTNDRD
201: DAYGGSLENR CRFTAEVTAA VAAEVGGDRL GVRLSPFADY MDCHDSDPEA LGLHVIDKTL NPLGVLYCHM VEARMRVNPE DGNKMTLQQM LLPFRRAFRV
301: TFIASGGYDR EEGNAAIAHG YADLIAYGRM FLANPDLPAR FAKKAALNKY DRSTFYTSDP VVGYTDYPFL DQF

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.