CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P02810_001	Banana	plastid	74.34	84.16
Zm00001d003584_P001	Maize	extracellular	90.09	79.03
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	82.22	76.22
KXG26383	Sorghum	plastid	79.88	73.07
Solyc11g032130.1.1	Tomato	mitochondrion	73.47	71.19
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	73.18	67.11
Bra008591.1-P	Field mustard	plastid	73.18	67.11
Bra008271.1-P	Field mustard	peroxisome	72.89	66.84
Solyc10g086220.1.1	Tomato	extracellular	72.3	65.96
AT1G09400.1	Thale cress	mitochondrion	60.35	63.89
AT1G76680.2	Thale cress	peroxisome	73.76	63.73
VIT_18s0041g02090.t01	Wine grape	cytosol	15.16	63.41
Bra031012.1-P	Field mustard	cytosol	68.51	63.34
Bra030773.1-P	Field mustard	plastid	67.35	61.6
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	69.1	61.56
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	48.1	61.34
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	48.1	61.34
Solyc11g032230.1.1	Tomato	cytosol	58.31	61.16
KXG30433	Sorghum	mitochondrion, plastid	65.31	61.04
EER89419	Sorghum	mitochondrion, peroxisome, plastid	68.22	60.78
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.77	60.74
EER89417	Sorghum	peroxisome	65.6	60.48
Bra030774.1-P	Field mustard	plastid	20.99	60.0
EES15864	Sorghum	peroxisome	64.43	59.25
KXG21012	Sorghum	cytosol	62.97	59.02
EER88073	Sorghum	cytosol	64.72	58.89
EER89418	Sorghum	cytosol	62.39	56.76
EES12232	Sorghum	mitochondrion	62.1	56.2
OQU79576	Sorghum	plastid	22.45	50.0
EES13971	Sorghum	peroxisome, plastid	54.23	46.27
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	4.08	29.17

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:8080349	UniProt:A0A1B6PL33	InterPro:Aldolase_TIM	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	EnsemblPlants:KXG26381	ProteinID:KXG26381	ProteinID:KXG26381.1
InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	EnsemblPlantsGene:SORBI_3006G091600	SUPFAM:SSF51395
unigene:Sbi.15557	UniParc:UPI00081AE54E	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:46179690..46183241

Molecular Weight (calculated)

38040.1 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.341

Length

343 amino acids

Sequence
(BLAST)

001: MASGGANTVP LATPYKMGKF DLSHRVVLAP LTRQRSYGNV PQPHAILYYQ QRTTKGGLLI AEATGVSDTA QGYKDTPGIW TNEQVEAWKP IVDGVHQKGG
101: IFFCQIWHVG RVSNSSFQPN GQAPISSTDK PLKPQVRANG VDVATFTPPR RLETDEIPLV INDFRVAARN AIEAGFDGVE IHGAHGYLID QFLKDQVNDR
201: TDKYGGSLEN RCRFALEIVQ AVVDEIGADK ALDKFGILYC HMVEPRMVKL GEKFETPYSL RPMRDAFKGT FIVAGGYTRE DGNDAISTGY ADLIAYGRLF
301: LSNPDLPRRL EIDGPLNKYN RDTFYIPDPV IGYTDYPFLS SDV

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.