CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G328200.1	Wheat	cytosol	68.07	69.73
Os04t0443750-00	Rice	cytoskeleton, cytosol, peroxisome	34.56	69.31
TraesCS2D01G309500.1	Wheat	golgi	67.55	69.19
HORVU2Hr1G077210.1	Barley	cytosol	67.55	67.9
EER89419	Sorghum	mitochondrion, peroxisome, plastid	66.75	65.71
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	66.49	65.45
KXG30433	Sorghum	mitochondrion, plastid	62.8	64.85
EER89417	Sorghum	peroxisome	62.53	63.71
KXG26381	Sorghum	plastid	56.2	62.1
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	59.89	61.35
KXG26383	Sorghum	plastid	60.42	61.07
EER88073	Sorghum	cytosol	60.42	60.74
EER89418	Sorghum	cytosol	59.37	59.68
KXG21012	Sorghum	cytosol	57.52	59.56
KRH51591	Soybean	cytosol	58.58	59.2
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	56.73	57.49
EES15864	Sorghum	peroxisome	56.46	57.37
KRH05151	Soybean	nucleus	51.98	55.97
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.15	55.88
KRH17523	Soybean	cytosol	56.46	54.45
EES13971	Sorghum	peroxisome, plastid	49.87	47.01
OQU79576	Sorghum	plastid	18.21	44.81
KRH06010	Soybean	mitochondrion	18.73	40.34

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:8080352	InterPro:Aldolase_TIM	UniProt:C5Y961	EnsemblPlants:EES12232
ProteinID:EES12232	ProteinID:EES12232.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF59	EnsemblPlantsGene:SORBI_3006G091900	SUPFAM:SSF51395	UniParc:UPI0001A8720B	RefSeq:XP_002447904.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:46200691..46203231

Molecular Weight (calculated)

42531.5 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.379

Length

379 amino acids

Sequence
(BLAST)

001: MENIPLLSPY ETKRFRFSHR TVLAPLTRAR SYGNLPQSHA ILYYSQRATE GGLLIAEATG VSSDAQGMSL IPHTPGIWTK EQVEAWKPVV DAVHAKGGIF
101: FCQIWHVGRA SDMEKEPISS TDKPVEKNGD DHMDFPIPRC LTVEEIPDVI NHFRIAARNA VDAGFDGVEI HGAHGFLLEQ FMKDSVNDRT DKYGGSIQNR
201: CRFALEVVDA VVAEVGSDRV GIRLSPYANY LGCHDSDPDR LGVYMAQELN RYNILYCSAV EPEMVMVDGK MKIPHSLQEM RKAFNGTFMV GGGYDREEGN
301: RVVADGYADM VVYGRLFLAN PDLPRRFQLN APLNKYDRST FYTDDPVVGY TDYPFLENSE PLNSLTRRGG IYQNKEGMI

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.