CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0559400-01	Rice	cytosol, peroxisome	87.47	79.06
EER89417	Sorghum	peroxisome	68.12	67.2
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	70.3	67.01
EER89419	Sorghum	mitochondrion, peroxisome, plastid	69.75	66.49
KXG26381	Sorghum	plastid	61.04	65.31
EER88073	Sorghum	cytosol	65.94	64.19
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	64.58	64.05
EER89418	Sorghum	cytosol	64.85	63.13
EES12232	Sorghum	mitochondrion	64.85	62.8
KXG21012	Sorghum	cytosol	62.13	62.3
EES15864	Sorghum	peroxisome	62.67	61.66
KXG26383	Sorghum	plastid	62.94	61.6
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.13	60.96
KRH51591	Soybean	cytosol	61.58	60.27
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	59.95	58.82
KRH05151	Soybean	nucleus	53.68	55.97
KRH17523	Soybean	cytosol	58.58	54.71
OQU79576	Sorghum	plastid	20.71	49.35
EES13971	Sorghum	peroxisome, plastid	52.59	48.01
KRH06010	Soybean	mitochondrion	17.98	37.5

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	UniProt:A0A194YQC6	InterPro:Aldolase_TIM	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:IPR013785	EnsemblPlants:KXG30433	ProteinID:KXG30433	ProteinID:KXG30433.1	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF45	EnsemblPlantsGene:SORBI_3004G180500	SUPFAM:SSF51395	UniParc:UPI0007F2E84F

Description

hypothetical protein

Coordinates

chr4:-:53288735..53292382

Molecular Weight (calculated)

40958.4 Da

IEP (calculated)

5.422

GRAVY (calculated)

-0.328

Length

367 amino acids

Sequence
(BLAST)

001: MEAKAIPLLT PYTMGRFHLS HRVVHAPLTR SRCYNNLPGE HVALYYSQRA SEGGLLISES TGVSESAQGY PSTPGIWTKD QVEAWKPVVE GVHQKGGVFF
101: CQIWHVGRAS TYDYQPNGQA PISCTDKQIT PKVLDDGTVE EFSAPRRLRE DEIPQIVNDF RLAARNCIEA GFDGVEIHCA FGYLIEQFMK DSVNDRTDEY
201: GGSMENRCRF ALEVIQAAID EVGADKVGVR LSPYSNCLDC WDSDPDALGL YMIHAMNKLG VLYCSMVEPE VVKVDGKVQI PHKLLHFRKA FSGTSIVGGG
301: YNREEGNRAV SEGYTDLVAY GKWFLANPDL PKRFELNAPL NKYDRSTFYT PDPVVGYTDY PFISPSV

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.