Factsheet for Os02t0559400-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

plastid 4
cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 23602899
peroxisome: 23602899

extracellular: 25047395

gfp PMID: 23602899 doi

MJ Hong, Ym Lee, YS Son, CH Im, YB Yi, YG Rim, JD Bahk, JB Heo

Department of Molecular Biotechnology, Dong-A University, Busan 604-714, South Korea.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30433	Sorghum	mitochondrion, plastid	79.06	87.47
Os06t0216200-00	Rice	plasma membrane	60.1	64.89
Os06t0215600-02	Rice	plastid	58.87	63.9
Os06t0215900-02	Rice	cytosol	58.87	62.89
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	57.64	62.57
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	55.66	60.43
Os06t0215500-01	Rice	cytosol, nucleus, peroxisome	58.13	60.36
KRH51591	Soybean	cytosol	55.42	60.0
Os06t0216000-01	Rice	plastid	18.47	59.52
KRH05151	Soybean	nucleus	48.52	55.97
Os06t0216300-01	Rice	plastid	20.94	55.92
Os04t0443750-00	Rice	cytoskeleton, cytosol, peroxisome	25.62	55.03
KRH17523	Soybean	cytosol	52.46	54.2
Os08t0459600-01	Rice	cytosol	47.54	48.98
Os01t0369900-01	Rice	cytosol	18.47	41.44
KRH06010	Soybean	mitochondrion	16.75	38.64
Os01t0370000-01	Rice	mitochondrion	38.67	38.11

Protein Annotations

Gene3D:3.20.20.70	EntrezGene:4329684	MapMan:50.1.3	EMBL:AK069898	InterPro:Aldolase_TIM	ProteinID:BAD16527.1
ProteinID:BAF09062.1	ProteinID:BAS79243.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010181	GO:GO:0016491
GO:GO:0031408	GO:GO:0055114	InterPro:IPR013785	EnsemblPlantsGene:Os02g0559400	EnsemblPlants:Os02t0559400-01	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF45	UniProt:Q0E0C6	SUPFAM:SSF51395	UniParc:UPI000043DF30
RefSeq:XP_015627742.1	:	:	:	:	:

Description

12-OXOPHYTODIENOATE REDUCTASE 812-oxophytodienoic acid reductase (EC:1.3.1.-), Jasmonic acid (JA)-mediated defense signaling (Os02t0559400-01);Similar to 12-oxo-phytodienoic acid reductase5. (Os02t0559400-02)

Coordinates

chr2:-:21228967..21231366

Molecular Weight (calculated)

45517.3 Da

IEP (calculated)

7.123

GRAVY (calculated)

-0.283

Length

406 amino acids

Sequence
(BLAST)

001: MIRKKASPHC LHDVSGSCPH LSILLHSSRR PESAPVPCLL PMEAKIPLLT PHTMGRFHLA HRVVHAPLTR SRCYNNLPQE HVQLYYSQRA TNGGLLIAEA
101: TGVSETAQGY PNTPGIWTKE QVEAWRTVVD AVHQKGGVFF CQIWHVGRAS TNDYQPNGQT PIPCTDKKIT PTVLKDGTVE EFSAPRRLRE DEIPQIVDDF
201: RIAARNCIEA GFDGVEIHCA FGYLIEQFMK DGVNDRTDKY GGSIANRCRF ALEVIQAAID EIGSDRVGVR LSPYSNCLDC WDSDPDALGL YMIQAMSKLG
301: VLYCSMVEPE VVKVDGKVQI PYKLWHFRKV FAGTFIVAGG YNREEGNRAV SQGYTDLVAY GKWFLANPDL PRRFELNAPL NKYDRSTFYT SDPVIGYTDY
401: PFLSPL

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.