Factsheet for Os06t0216200-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 3
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G176000.1	Wheat	cytosol	51.86	84.05
TraesCS7A01G174700.1	Wheat	mitochondrion	82.45	84.01
TraesCS7B01G079500.1	Wheat	mitochondrion	81.91	83.7
HORVU7Hr1G036070.2	Barley	cytosol, mitochondrion, peroxisome	82.18	82.62
Os06t0215900-02	Rice	cytosol	83.24	82.37
TraesCS7A01G174500.1	Wheat	cytosol	72.34	81.44
OQU76054	Sorghum	mitochondrion, peroxisome, plastid	83.24	81.3
TraesCS7D01G175800.1	Wheat	mitochondrion	64.63	81.27
EER89417	Sorghum	peroxisome	80.05	80.91
EER89419	Sorghum	mitochondrion, peroxisome, plastid	82.45	80.52
Os06t0216300-01	Rice	plastid	32.45	80.26
Zm00001d044908_P001	Maize	mitochondrion, peroxisome, plastid	80.05	80.05
Zm00001d044906_P001	Maize	mitochondrion, peroxisome, plastid	79.26	79.89
HORVU7Hr1G036060.3	Barley	mitochondrion	77.66	79.35
EER88073	Sorghum	cytosol	78.99	78.78
Os06t0215600-02	Rice	plastid	77.93	78.34
TraesCS7B01G079400.1	Wheat	cytosol, vacuole	59.31	78.25
TraesCS7D01G175700.2	Wheat	mitochondrion	28.99	77.31
Os06t0215500-01	Rice	cytosol, nucleus, peroxisome	79.79	76.73
TraesCS7D01G175900.2	Wheat	cytosol	82.98	76.47
GSMUA_Achr2P20790_001	Banana	mitochondrion	60.37	75.17
GSMUA_Achr2P20800_001	Banana	mitochondrion	71.81	73.97
EER89418	Sorghum	cytosol	73.94	73.74
Os06t0216000-01	Rice	plastid	24.2	72.22
TraesCS7D01G175600.1	Wheat	mitochondrion	52.39	71.38
TraesCS7B01G079300.1	Wheat	cytosol, peroxisome, plastid	71.81	71.05
KRH51591	Soybean	cytosol	63.03	63.2
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	62.5	62.83
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.37	60.7
Os02t0559400-01	Rice	cytosol, peroxisome	64.89	60.1
KRH17523	Soybean	cytosol	60.64	58.02
KRH05151	Soybean	nucleus	53.99	57.67
Os04t0443750-00	Rice	cytoskeleton, cytosol, peroxisome	26.86	53.44
Os08t0459600-01	Rice	cytosol	55.05	52.54
KRH06010	Soybean	mitochondrion	19.95	42.61
Os01t0369900-01	Rice	cytosol	20.48	42.54
Os01t0370000-01	Rice	mitochondrion	43.35	39.56

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	InterPro:Aldolase_TIM	ProteinID:BAD35325.1	ProteinID:BAD35833.1	ProteinID:BAF19058.1
ProteinID:BAS96787.1	ProteinID:EEE65331.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009695
GO:GO:0009987	GO:GO:0010181	GO:GO:0016491	GO:GO:0016629	GO:GO:0031408	GO:GO:0055114
InterPro:IPR013785	EnsemblPlantsGene:Os06g0216200	EnsemblPlants:Os06t0216200-00	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893
PANTHER:PTHR22893:SF44	UniProt:Q69TH4	SUPFAM:SSF51395	UniParc:UPI000040375C	SEG:seg	:

Description

12-OXOPHYTODIENOATE REDUCTASE 2Similar to Oxo-phytodienoic acid reductase. (Os06t0216200-00)

Coordinates

chr6:-:5913057..5914285

Molecular Weight (calculated)

42070.7 Da

IEP (calculated)

5.928

GRAVY (calculated)

-0.365

Length

376 amino acids

Sequence
(BLAST)

001: MVHAPAKEAI PLLTPYKMGQ LELSHRVVLA PLTRCRSYGH VPQPHAAVYY SQRATNGGLL IAEATVISPT AQGYPDTPGI YTQQQIEAWK PIVDAVHRKG
101: ALFFLQIWHV GRVSTTDFQP NGQAPISSTD KQITPDDSGM VYSKPRRLRT DEIPQIVDDF RRAARNAIES GFDGVEIHGA HGYLLDQFMK DSANDRTDEY
201: GGNLENRCRF AVEVIDAVVA EVGAHRVGIR LSPFDNYMDC FDSNPVALGS YMVQQLNKHP GFLYCHMVEP GMAIVEGRRK ITHGLLPFRK QFNGTFIAAG
301: GYDREEGNKV VADGYADLVA YGRLFLANPD LPRRFELDAP LNRYDRSTFY TQDPVVGYTD YPFLEEIDEE STTTYA

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.