Factsheet for Solyc10g086220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	37.23	78.21
Solyc11g032130.1.1	Tomato	mitochondrion	72.34	76.84
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	77.39	76.78
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	75.8	75.2
VIT_18s0041g02050.t01	Wine grape	mitochondrion	69.15	74.71
VIT_18s0041g02070.t01	Wine grape	mitochondrion	73.4	74.19
CDX69416	Canola	mitochondrion, plastid	73.4	73.8
CDY20395	Canola	cytosol, mitochondrion, peroxisome	72.87	73.66
CDY45941	Canola	plastid	72.87	73.66
VIT_18s0041g02020.t01	Wine grape	cytosol	74.2	73.61
Bra008591.1-P	Field mustard	plastid	73.14	73.53
VIT_18s0041g02010.t01	Wine grape	cytosol	72.34	73.32
Bra008271.1-P	Field mustard	peroxisome	72.87	73.26
CDY16975	Canola	mitochondrion, plastid	72.07	72.65
KXG26381	Sorghum	plastid	65.96	72.3
Solyc11g032230.1.1	Tomato	cytosol	62.5	71.87
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	71.28	71.66
TraesCS2A01G311200.3	Wheat	mitochondrion	69.68	71.58
TraesCS6D01G302300.2	Wheat	plastid	69.95	71.08
TraesCS6B01G353200.2	Wheat	plastid	69.68	70.81
TraesCS2D01G309400.1	Wheat	plastid	69.41	70.54
CDY21723	Canola	cytosol, mitochondrion, peroxisome	68.09	70.52
KXG26383	Sorghum	plastid	70.21	70.4
VIT_18s0041g02270.t01	Wine grape	vacuole	31.12	70.06
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	68.88	69.62
TraesCS2B01G328100.1	Wheat	plastid	68.09	69.57
Bra031012.1-P	Field mustard	cytosol	68.62	69.54
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	49.47	69.14
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	49.47	69.14
VIT_18s0041g02040.t01	Wine grape	cytosol	61.97	68.53
AT1G76680.2	Thale cress	peroxisome	72.34	68.51
CDX81857	Canola	cytosol	67.29	68.19
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	66.76	67.84
GSMUA_Achr6P17440_001	Banana	cytosol	57.18	66.98
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.39	66.11
Zm00001d003584_P001	Maize	extracellular	68.62	65.98
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	7.45	58.33
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	64.36	56.28
Solyc01g103390.2.1	Tomato	plastid	51.06	54.08
Solyc07g007870.2.1	Tomato	plastid	55.85	53.03
Solyc04g039910.1.1	Tomato	cytosol	34.04	52.24
Solyc04g039920.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	11.7	50.57
CDY47292	Canola	mitochondrion, plastid	38.3	47.06
OQU79576	Sorghum	plastid	19.15	46.75
Solyc04g039930.2.1	Tomato	cytosol	14.36	44.26
Solyc09g098320.1.1	Tomato	mitochondrion	18.35	42.33
Os01t0369900-01	Rice	cytosol	19.95	41.44

Protein Annotations

PDB:1ICP	PDB:1ICQ	PDB:1ICS	Gene3D:3.20.20.70	PDB:3HGR	MapMan:50.1.3
EMBL:AJ242551	InterPro:Aldolase_TIM	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010181
GO:GO:0016491	GO:GO:0016629	GO:GO:0031408	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	UniProt:Q9XG54	SUPFAM:SSF51395	EnsemblPlantsGene:Solyc10g086220.1
EnsemblPlants:Solyc10g086220.1.1	UniParc:UPI00000A3B73	:	:	:	:

Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XG54]

Coordinates

chr10:-:65120856..65122188

Molecular Weight (calculated)

42417.5 Da

IEP (calculated)

6.192

GRAVY (calculated)

-0.396

Length

376 amino acids

Sequence
(BLAST)

001: MENKVVEEKQ VDKIPLMSPC KMGKFELCHR VVLAPLTRQR SYGYIPQPHA ILHYSQRSTN GGLLIGEATV ISETGIGYKD VPGIWTKEQV EAWKPIVDAV
101: HAKGGIFFCQ IWHVGRVSNK DFQPNGEDPI SCTDRGLTPQ IRSNGIDIAH FTRPRRLTTD EIPQIVNEFR VAARNAIEAG FDGVEIHGAH GYLIDQFMKD
201: QVNDRSDKYG GSLENRCRFA LEIVEAVANE IGSDRVGIRI SPFAHYNEAG DTNPTALGLY MVESLNKYDL AYCHVVEPRM KTAWEKIECT ESLVPMRKAY
301: KGTFIVAGGY DREDGNRALI EDRADLVAYG RLFISNPDLP KRFELNAPLN KYNRDTFYTS DPIVGYTDYP FLETMT

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.