Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g098320.1.1 | Tomato | mitochondrion | 61.48 | 46.01 |
| PGSC0003DMT400007644 | Potato | extracellular, mitochondrion | 81.15 | 31.53 |
| Solyc04g039910.1.1 | Tomato | cytosol | 45.9 | 22.86 |
| Solyc01g103390.2.1 | Tomato | plastid | 58.2 | 20.0 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 48.36 | 16.67 |
| Solyc11g032230.1.1 | Tomato | cytosol | 43.44 | 16.21 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.25 | 14.43 |
| Solyc10g086220.1.1 | Tomato | extracellular | 44.26 | 14.36 |
| Solyc07g007870.2.1 | Tomato | plastid | 39.34 | 12.12 |
| Solyc04g039920.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 5.74 | 8.05 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.3 | InterPro:Aldolase_TIM | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR013785 | UniProt:K4BRD1 | InterPro:OxRdtase_FMN_N |
| PFAM:PF00724 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | SUPFAM:SSF51395 | EnsemblPlantsGene:Solyc04g039930.2 | EnsemblPlants:Solyc04g039930.2.1 |
| UniParc:UPI0002766019 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:12376705..12377388
Molecular Weight (calculated)
13473.1 Da
IEP (calculated)
5.180
GRAVY (calculated)
-0.085
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIENTHFPF LPNSTIAFND RIDAYGGNIE NRCRLALEII GTVVEEIGAD KVGVKLSLFS KVYVRKDSNP EALSTYLASE LTKLGVLYLH VFEPRDEPCC
101: LKSIRNAFEG TLIASGGYNK TD
101: LKSIRNAFEG TLIASGGYNK TD
001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA
Arabidopsis Description
OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [cytoskeleton,peroxisome,mitochondrion]
SUBAcon: [cytoskeleton,peroxisome,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.