Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400064103 | Potato | cytosol, nucleus, peroxisome, plastid | 81.97 | 94.48 |
| Solyc04g039920.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 14.93 | 60.92 |
| Solyc04g039930.2.1 | Tomato | cytosol | 20.0 | 58.2 |
| Solyc04g039910.1.1 | Tomato | cytosol | 38.87 | 56.33 |
| Solyc09g098320.1.1 | Tomato | mitochondrion | 25.63 | 55.83 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 54.37 | 54.52 |
| Solyc10g086220.1.1 | Tomato | extracellular | 54.08 | 51.06 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.0 | 47.65 |
| Solyc11g032230.1.1 | Tomato | cytosol | 42.82 | 46.48 |
| Solyc07g007870.2.1 | Tomato | plastid | 44.23 | 39.65 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.3 | InterPro:Aldolase_TIM | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR013785 | UniProt:K4B1R5 |
| InterPro:OxRdtase_FMN_N | PFAM:PF00724 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | SUPFAM:SSF51395 | EnsemblPlantsGene:Solyc01g103390.2 |
| EnsemblPlants:Solyc01g103390.2.1 | UniParc:UPI0002768230 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:-:91999711..92002327
Molecular Weight (calculated)
39353.6 Da
IEP (calculated)
5.721
GRAVY (calculated)
-0.308
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANSNSAVP LCTPYKLGRF KLTHRIVFPA LTRNRSQNNT PQPHLTEYYS QRATNGGLII SEAAAASDIS KECPNLPGIW NEEQVEAWKP VVNGVHEKGG
101: VFFCQIWHSG RLSVPTVSAL FFSIGIGWST RPDDKVYAKP TPLPLESDKI PCIVNDFRIA ARNAIKAGFD GIEINASSGG YLIDEFMNDQ VHGWTDEYDE
201: SIKDRCRLAL EIVEAVANEI GADKIGIKLS PFDGKKDSNS EALATYMANE LSKLGVLYLH VMEPRETVNR SLLPIRKAFK GTLIASGGYG KSDGEKAIDE
301: NYADLISFGR MFLANPDLPK RFEVNAPLNK YNRSTFYTND PIIGYTDYPF LEVAS
101: VFFCQIWHSG RLSVPTVSAL FFSIGIGWST RPDDKVYAKP TPLPLESDKI PCIVNDFRIA ARNAIKAGFD GIEINASSGG YLIDEFMNDQ VHGWTDEYDE
201: SIKDRCRLAL EIVEAVANEI GADKIGIKLS PFDGKKDSNS EALATYMANE LSKLGVLYLH VMEPRETVNR SLLPIRKAFK GTLIASGGYG KSDGEKAIDE
301: NYADLISFGR MFLANPDLPK RFEVNAPLNK YNRSTFYTND PIIGYTDYPF LEVAS
001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA
Arabidopsis Description
OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.