Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- peroxisome 1
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g103390.2.1 | Tomato | plastid | 94.48 | 81.97 |
PGSC0003DMT400007644 | Potato | extracellular, mitochondrion | 56.82 | 55.73 |
PGSC0003DMT400048327 | Potato | cytosol | 32.14 | 55.31 |
PGSC0003DMT400048325 | Potato | cytosol | 23.05 | 54.62 |
PGSC0003DMT400048328 | Potato | cytosol | 31.17 | 52.17 |
PGSC0003DMT400080542 | Potato | extracellular | 18.18 | 49.56 |
PGSC0003DMT400048331 | Potato | mitochondrion | 51.95 | 45.85 |
PGSC0003DMT400055707 | Potato | peroxisome | 56.17 | 44.94 |
PGSC0003DMT400048344 | Potato | cytosol | 54.22 | 44.65 |
PGSC0003DMT400072012 | Potato | cytosol | 17.86 | 37.41 |
PGSC0003DMT400079356 | Potato | plastid | 43.18 | 33.25 |
PGSC0003DMT400082779 | Potato | cytosol | 6.17 | 29.23 |
Protein Annotations
EntrezGene:102585605 | Gene3D:3.20.20.70 | MapMan:50.1.3 | InterPro:Aldolase_TIM | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 |
GO:GO:0055114 | InterPro:IPR013785 | UniProt:M1CBR4 | InterPro:OxRdtase_FMN_N | PFAM:PF00724 | EnsemblPlantsGene:PGSC0003DMG400024910 |
PGSC:PGSC0003DMG400024910 | EnsemblPlants:PGSC0003DMT400064103 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | SUPFAM:SSF51395 | UniParc:UPI000295F79F |
RefSeq:XP_015165026.1 | : | : | : | : | : |
Description
12-oxophytodienoate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400024910]
Coordinates
chr1:-:80092250..80094340
Molecular Weight (calculated)
34241.7 Da
IEP (calculated)
5.103
GRAVY (calculated)
-0.289
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAISNSAVP LCTPYKLGRF ELTHRCPNLP GIWNEEQVEA WKPVVKGVHE KGGVFFCQIW HSGRLSVPTI SALYFSIGIG WSTRPDDQVY EKPTLLPLKS
101: DKIPCIVNDF RIAARNTIKA GFDGIEINAS SGGYLIDEFM NDQIHGRTDE YDESIEDRCR LALEIVEAVA NEIGADKIGI KLSPFDGKKD SNSEALATYM
201: ANELSKLGVL YLHVMEPRET ANKSLLPIRK AFKGTLIASG GYGKSDGDKA IDENYADLIS FGRMFLANPD LPKRFEVNAP LNKYNRSTFY TNDPIIGYTD
301: YPSLEVAS
101: DKIPCIVNDF RIAARNTIKA GFDGIEINAS SGGYLIDEFM NDQIHGRTDE YDESIEDRCR LALEIVEAVA NEIGADKIGI KLSPFDGKKD SNSEALATYM
201: ANELSKLGVL YLHVMEPRET ANKSLLPIRK AFKGTLIASG GYGKSDGDKA IDENYADLIS FGRMFLANPD LPKRFEVNAP LNKYNRSTFY TNDPIIGYTD
301: YPSLEVAS
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.