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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:
  • cytosol 3
  • plastid 2
  • peroxisome 1
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g103390.2.1 Tomato plastid 94.48 81.97
PGSC0003DMT400007644 Potato extracellular, mitochondrion 56.82 55.73
PGSC0003DMT400048327 Potato cytosol 32.14 55.31
PGSC0003DMT400048325 Potato cytosol 23.05 54.62
PGSC0003DMT400048328 Potato cytosol 31.17 52.17
PGSC0003DMT400080542 Potato extracellular 18.18 49.56
PGSC0003DMT400048331 Potato mitochondrion 51.95 45.85
PGSC0003DMT400055707 Potato peroxisome 56.17 44.94
PGSC0003DMT400048344 Potato cytosol 54.22 44.65
PGSC0003DMT400072012 Potato cytosol 17.86 37.41
PGSC0003DMT400079356 Potato plastid 43.18 33.25
PGSC0003DMT400082779 Potato cytosol 6.17 29.23
Protein Annotations
EntrezGene:102585605Gene3D:3.20.20.70MapMan:50.1.3InterPro:Aldolase_TIMGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0010181GO:GO:0016491
GO:GO:0055114InterPro:IPR013785UniProt:M1CBR4InterPro:OxRdtase_FMN_NPFAM:PF00724EnsemblPlantsGene:PGSC0003DMG400024910
PGSC:PGSC0003DMG400024910EnsemblPlants:PGSC0003DMT400064103PANTHER:PTHR22893PANTHER:PTHR22893:SF88SUPFAM:SSF51395UniParc:UPI000295F79F
RefSeq:XP_015165026.1:::::
Description
12-oxophytodienoate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400024910]
Coordinates
chr1:-:80092250..80094340
Molecular Weight (calculated)
34241.7 Da
IEP (calculated)
5.103
GRAVY (calculated)
-0.289
Length
308 amino acids
Sequence
(BLAST)
001: MEAISNSAVP LCTPYKLGRF ELTHRCPNLP GIWNEEQVEA WKPVVKGVHE KGGVFFCQIW HSGRLSVPTI SALYFSIGIG WSTRPDDQVY EKPTLLPLKS
101: DKIPCIVNDF RIAARNTIKA GFDGIEINAS SGGYLIDEFM NDQIHGRTDE YDESIEDRCR LALEIVEAVA NEIGADKIGI KLSPFDGKKD SNSEALATYM
201: ANELSKLGVL YLHVMEPRET ANKSLLPIRK AFKGTLIASG GYGKSDGDKA IDENYADLIS FGRMFLANPD LPKRFEVNAP LNKYNRSTFY TNDPIIGYTD
301: YPSLEVAS
Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.