Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048327 | Potato | cytosol | 91.54 | 66.48 |
| VIT_18s0041g02260.t01 | Wine grape | cytosol, peroxisome, plastid | 77.69 | 56.42 |
| PGSC0003DMT400080542 | Potato | extracellular | 48.46 | 55.75 |
| PGSC0003DMT400048328 | Potato | cytosol | 68.46 | 48.37 |
| PGSC0003DMT400072012 | Potato | cytosol | 47.69 | 42.18 |
| Solyc11g032230.1.1 | Tomato | cytosol | 80.0 | 31.8 |
| PGSC0003DMT400048331 | Potato | mitochondrion | 83.08 | 30.95 |
| PGSC0003DMT400048344 | Potato | cytosol | 86.15 | 29.95 |
| VIT_18s0041g02060.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 78.46 | 26.91 |
| VIT_18s0041g02080.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 77.69 | 26.65 |
| CDY21723 | Canola | cytosol, mitochondrion, peroxisome | 73.08 | 26.17 |
| Bra031012.1-P | Field mustard | cytosol | 73.85 | 25.88 |
| AT1G76690.1 | Thale cress | cytoskeleton, mitochondrion, peroxisome | 73.08 | 25.4 |
| VIT_18s0041g02020.t01 | Wine grape | cytosol | 73.85 | 25.33 |
| VIT_18s0041g02040.t01 | Wine grape | cytosol | 66.15 | 25.29 |
| CDY45941 | Canola | plastid | 72.31 | 25.27 |
| Bra008271.1-P | Field mustard | peroxisome | 72.31 | 25.13 |
| Bra008591.1-P | Field mustard | plastid | 72.31 | 25.13 |
| CDX69416 | Canola | mitochondrion, plastid | 72.31 | 25.13 |
| VIT_18s0041g02050.t01 | Wine grape | mitochondrion | 66.92 | 25.0 |
| CDY20395 | Canola | cytosol, mitochondrion, peroxisome | 71.54 | 25.0 |
| CDY16975 | Canola | mitochondrion, plastid | 70.0 | 24.4 |
| CDX81857 | Canola | cytosol | 69.23 | 24.26 |
| AT1G76680.2 | Thale cress | peroxisome | 73.08 | 23.93 |
| VIT_18s0041g02070.t01 | Wine grape | mitochondrion | 67.69 | 23.66 |
| VIT_18s0041g02010.t01 | Wine grape | cytosol | 66.15 | 23.18 |
| PGSC0003DMT400064103 | Potato | cytosol, nucleus, peroxisome, plastid | 54.62 | 23.05 |
| CDY47292 | Canola | mitochondrion, plastid | 51.54 | 21.9 |
| PGSC0003DMT400007644 | Potato | extracellular, mitochondrion | 50.0 | 20.7 |
| GSMUA_Achr6P17440_001 | Banana | cytosol | 43.85 | 17.76 |
| PGSC0003DMT400055707 | Potato | peroxisome | 49.23 | 16.62 |
| PGSC0003DMT400079356 | Potato | plastid | 50.0 | 16.25 |
| PGSC0003DMT400082779 | Potato | cytosol | 3.85 | 7.69 |
| AT1G18020.1 | Thale cress | mitochondrion, peroxisome, plastid | 15.38 | 7.43 |
| AT1G17990.1 | Thale cress | mitochondrion, peroxisome, plastid | 15.38 | 7.43 |
| VIT_18s0041g02270.t01 | Wine grape | vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400048325 | EnsemblPlantsGene:PGSC0003DMG401018777 | Gene3D:3.20.20.70 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 |
| InterPro:Aldolase_TIM | InterPro:IPR013785 | InterPro:OxRdtase_FMN_N | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | PFAM:PF00724 |
| PGSC:PGSC0003DMG401018777 | SUPFAM:SSF51395 | UniParc:UPI000295F2A2 | UniProt:M1BM99 | MapMan:50.1.3 | : |
Description
12-oxophytodienoate reductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG401018777]
Coordinates
chr11:-:17400333..17401171
Molecular Weight (calculated)
14523.5 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.208
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGDSNPSA LGLYMAESLN KYGISYCHMV EPRMKTLAEK VECPESLVPM RKAFKGTFLV AGGYDRGDGN KALIEDRTDL VVYGRLFLAN PDLPKRFELD
101: APLNKYIRET FYISDPVVGY TDYPLLETAA
101: APLNKYIRET FYISDPVVGY TDYPLLETAA
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.