Factsheet for GSMUA_Achr6P17440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P20790_001	Banana	mitochondrion	71.34	75.83
GSMUA_Achr6P07450_001	Banana	mitochondrion	65.11	73.59
GSMUA_Achr3P02810_001	Banana	plastid	69.16	73.27
CDY32174	Canola	cytosol, peroxisome, plastid	18.38	71.95
VIT_18s0041g02270.t01	Wine grape	vacuole	36.14	69.46
GSMUA_Achr2P20800_001	Banana	mitochondrion	72.9	64.11
Solyc11g032130.1.1	Tomato	mitochondrion	69.16	62.71
PGSC0003DMT400048331	Potato	mitochondrion	66.67	61.32
KRG94044	Soybean	cytosol	68.54	60.27
CDY32175	Canola	plastid	47.66	60.24
VIT_18s0041g02050.t01	Wine grape	mitochondrion	65.11	60.06
CDY20395	Canola	cytosol, mitochondrion, peroxisome	68.85	59.41
CDY45941	Canola	plastid	68.85	59.41
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	70.09	59.37
PGSC0003DMT400048344	Potato	cytosol	69.16	59.36
AT1G09400.1	Thale cress	mitochondrion	59.81	59.26
CDY16975	Canola	mitochondrion, plastid	68.85	59.25
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	69.78	59.1
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	68.85	59.09
Bra008271.1-P	Field mustard	peroxisome	68.85	59.09
KRH27669	Soybean	mitochondrion, plastid	67.91	58.76
KRH13220	Soybean	mitochondrion, peroxisome, plastid	66.04	58.73
CDY21723	Canola	cytosol, mitochondrion, peroxisome	66.36	58.68
VIT_18s0041g02020.t01	Wine grape	cytosol	69.16	58.58
CDX69416	Canola	mitochondrion, plastid	68.22	58.56
AT1G18020.1	Thale cress	mitochondrion, peroxisome, plastid	48.91	58.36
AT1G17990.1	Thale cress	mitochondrion, peroxisome, plastid	48.91	58.36
VIT_18s0041g02070.t01	Wine grape	mitochondrion	67.6	58.33
Bra008591.1-P	Field mustard	plastid	67.91	58.29
VIT_18s0041g02010.t01	Wine grape	cytosol	66.98	57.95
Bra031012.1-P	Field mustard	cytosol	66.36	57.41
Solyc10g086220.1.1	Tomato	extracellular	66.98	57.18
CDX81857	Canola	cytosol	66.04	57.14
Bra030773.1-P	Field mustard	plastid	66.36	56.8
CDY31095	Canola	plastid	66.36	56.8
Bra030774.1-P	Field mustard	plastid	21.18	56.67
KRH77822	Soybean	nucleus	70.09	55.97
KRH20560	Soybean	mitochondrion	63.24	55.31
AT1G76680.2	Thale cress	peroxisome	67.91	54.91
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.78	54.7
VIT_18s0041g02040.t01	Wine grape	cytosol	56.39	53.24
PGSC0003DMT400048328	Potato	cytosol	30.22	52.72
Solyc11g032230.1.1	Tomato	cytosol	52.34	51.38
PGSC0003DMT400048327	Potato	cytosol	28.04	50.28
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	27.1	48.6
GSMUA_Achr7P02310_001	Banana	mitochondrion	50.47	47.23
PGSC0003DMT400072012	Potato	cytosol	20.25	44.22
PGSC0003DMT400048325	Potato	cytosol	17.76	43.85
KRH51594	Soybean	cytosol	10.59	43.59
CDY47292	Canola	mitochondrion, plastid	33.64	35.29
PGSC0003DMT400080542	Potato	extracellular	12.15	34.51

Protein Annotations

EnsemblPlants:GSMUA_Achr6P17440_001	EnsemblPlants:GSMUA_Achr6T17440_001	EnsemblPlantsGene:GSMUA_Achr6G17440_001	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88
PFAM:PF00724	SUPFAM:SSF51395	UniParc:UPI0002955DDC	UniProt:M0T7U2	MapMan:50.1.3	:

Description

12-oxophytodienoate reductase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G17440_001]

Coordinates

chr6:+:11722083..11726750

Molecular Weight (calculated)

35913.1 Da

IEP (calculated)

5.807

GRAVY (calculated)

-0.429

Length

321 amino acids

Sequence
(BLAST)

001: MFLCMLGNLD RASHEQRKNR KICYHFNLSW SSLDHRIVLA PLTRSRSYGN VPQPHAVLYY SQRTTTGGLL ISEAACVSDT GRGYPHTPGI WTKEHVEAWK
101: PIVDAVHAKG GIFFCQLWHT GRVSNTGYQP NGQAPISCTD KPVNSGLLLE DEPDEKFTVP RRLRTDEIPR VVDDFRNAAR NAIEAGFDGV EIHGAHGYLI
201: DQFLKDSVND RTDEYGGSLE KRCRFALEVV EAVVDEIGAE RVGAFKGTFI AAGGYDREEG NKVVAEGYTD LVAYGRLFIS NPDLPRRFEL DAPLNGYNRL
301: TFYTSDPVEG YTDYPFLEPS A

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.