Factsheet for GSMUA_Achr6P07450_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P20790_001	Banana	mitochondrion	76.76	72.19
GSMUA_Achr3P02810_001	Banana	plastid	75.35	70.63
GSMUA_Achr6P17440_001	Banana	cytosol	73.59	65.11
GSMUA_Achr2P20800_001	Banana	mitochondrion	77.46	60.27
KRH51591	Soybean	cytosol	73.59	55.73
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	67.61	51.34
KRH05151	Soybean	nucleus	63.38	51.14
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	66.2	50.27
KRH17523	Soybean	cytosol	68.31	49.36
GSMUA_Achr7P02310_001	Banana	mitochondrion	50.7	41.98
KRH06010	Soybean	mitochondrion	20.07	32.39

Protein Annotations

EnsemblPlants:GSMUA_Achr6P07450_001	EnsemblPlants:GSMUA_Achr6T07450_001	EnsemblPlantsGene:GSMUA_Achr6G07450_001	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF44
PFAM:PF00724	SUPFAM:SSF51395	UniParc:UPI000295E6C0	UniProt:M0T4Z4	MapMan:50.1.3	:

Description

12-oxophytodienoate reductase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G07450_001]

Coordinates

chr6:-:5058845..5061118

Molecular Weight (calculated)

31471.8 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.356

Length

284 amino acids

Sequence
(BLAST)

001: MAALPLLSPY KMGKFDLSHR IVLAPLTRSR SYGNVPQPIA VLYYSQRTSN GGFLIAEATG VSDTAQGIPH TPGIWTREQV EAWKPIVNAY QPNGEDPVSS
101: TDKAAPPYVY DNGYVDEFSP PRRLRTDEIP GIVNDFRVAA RNAVEAGFDG VEIHGAHGFL IEQFLKDSVN DRDDEYGGSL DRRCRFALEV VAAVADEIGA
201: DRAFKGTFIV AGGYDREEGN RVVADGYTDL VAYGRLFLAN PDLPKRFELD AQLNKYERLT FYTHDPVVGY TDYPFLESSA SSMR

Best Arabidopsis Sequence Match ( AT1G18020.1 )
(BLAST)

001: METKQSIPLL MPYKMGPFNL SHRVVLAPLT RSRSYGNIPQ PNAKLYYTQR TTPGGLLISE SCVVSETSLG YPDLPGLWNR DQVEAWKPIV DAVHSKGGIF
101: FCQIWHGGRV FHQDQPNGEA PVSSTDKPLM CKNMYGGQFK PPRRLRSDEL PAIVNDFRIA ARNAIEAGFD GVEVHGAHGY LIDQFLKDKV NDRSDQYGGS
201: LENRCRFALE VIEAVVNEIG SDRVGIRLSP FADYMESGDS NPEALGLYLV QAMNKHGMES STVTWLNLE

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 2B [Source:UniProtKB/Swiss-Prot;Acc:P0DI09]
SUBAcon: [mitochondrion,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.