Factsheet for GSMUA_Achr3P02810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P20790_001	Banana	mitochondrion	75.25	75.5
GSMUA_Achr6P07450_001	Banana	mitochondrion	70.63	75.35
KXG26381	Sorghum	plastid	84.16	74.34
GSMUA_Achr6P17440_001	Banana	cytosol	73.27	69.16
TraesCS2A01G311200.3	Wheat	mitochondrion	82.51	68.31
TraesCS2D01G309400.1	Wheat	plastid	82.51	67.57
TraesCS6B01G353200.2	Wheat	plastid	81.52	66.76
TraesCS6D01G302300.2	Wheat	plastid	81.19	66.49
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	80.53	65.59
TraesCS2B01G328100.1	Wheat	plastid	78.88	64.95
VIT_18s0041g02090.t01	Wine grape	cytosol	17.49	64.63
Zm00001d003584_P001	Maize	extracellular	82.84	64.19
KXG26382	Sorghum	cytoskeleton, cytosol, peroxisome	77.89	63.78
GSMUA_Achr2P20800_001	Banana	mitochondrion	75.58	62.74
KXG26383	Sorghum	plastid	77.23	62.4
KRH63555	Soybean	mitochondrion	14.52	57.14
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	76.24	53.72
GSMUA_Achr7P02310_001	Banana	mitochondrion	52.81	46.65
PGSC0003DMT400082779	Potato	cytosol	9.9	46.15
Os01t0369900-01	Rice	cytosol	24.42	40.88
CDY28613	Canola	golgi, plastid, vacuole	29.37	23.06
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	3.63	22.92

Protein Annotations

EnsemblPlants:GSMUA_Achr3P02810_001	EnsemblPlants:GSMUA_Achr3T02810_001	EnsemblPlantsGene:GSMUA_Achr3G02810_001	Gene3D:3.20.20.70	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491
GO:GO:0055114	InterPro:Aldolase_TIM	InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88
PFAM:PF00724	SUPFAM:SSF51395	UniParc:UPI000296880A	UniProt:M0SB99	MapMan:50.1.3	:

Description

12-oxophytodienoate reductase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G02810_001]

Coordinates

chr3:+:1826480..1829683

Molecular Weight (calculated)

33520.7 Da

IEP (calculated)

6.402

GRAVY (calculated)

-0.235

Length

303 amino acids

Sequence
(BLAST)

001: MAAANSVPLI TAYKMGKFDL SHRVVLAPLT RQRSYGNVPQ PHAILYYSQR ASKGGLLIAE ATGVSDTAQG YPCTPGIWTK EQVEAWKPIV NAVHEKGGIF
101: FCQIWHVGRV SNHDFQPNGQ APISSTAKPI TPQVRANGID VAIFSTPRRL RTEEIPLVVN DFRVAARNAI EAGFDGVEIH GAHGYLIDQF LKDKVNDRTD
201: RYGGSLENRC RFALEIVEAV VDEIGADRGT FIVVGGYDRE EGNTAIASGY ADLVAYGRLF LANPDLPRRF ELNAPLNKYN RETFYIQDPV VGYTDYPFLD
301: SDL

Best Arabidopsis Sequence Match ( AT1G76690.1 )
(BLAST)

001: MEMVNAEAKQ SVPLLTPYKM GRFNLSHRVV LAPLTRQKSY GSVPQPHAIL YYSQRTSPGG FLIAEATGVS DTAQGYPDTP GIWTKEHVEA WKPIVDAVHA
101: KGGIFFCQIW HVGRVSNRGF QPRRQAPISC TGKPIMPQMR ANGIDEARFT PPRRLSIEEI PGIVNDFRLA ARNAMEAGFD GVEIHGAHGY LIDQFMKDKV
201: NDRTDEYGGS LQNRCKFALE VVDAVAKEIG PDRVGIRLSP FADYMESGDT NPEALGLYMV ESLNKYGILY CHMIEPRMKT VGEIAACSHT LMPMREAFKG
301: TFISAGGFTR EDGNEAVAKG RTDLVAYGRW FLANPDLPKR FQLDAPLNKY NRSTFYTSDP VVGYTDYPSL ESTA

Arabidopsis Description

OPR2OPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W9S3]
SUBAcon: [mitochondrion,peroxisome,cytoskeleton]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.