Factsheet for PGSC0003DMT400082779

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
peroxisome 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63555	Soybean	mitochondrion	38.46	32.47
VIT_18s0041g02090.t01	Wine grape	cytosol	33.85	26.83
OQU79576	Sorghum	plastid	38.46	16.23
Os01t0369900-01	Rice	cytosol	33.85	12.15
GSMUA_Achr3P02810_001	Banana	plastid	46.15	9.9
PGSC0003DMT400048344	Potato	cytosol	52.31	9.09
TraesCS6D01G302300.2	Wheat	plastid	47.69	8.38
TraesCS2D01G309400.1	Wheat	plastid	47.69	8.38
TraesCS6B01G464800.1	Wheat	mitochondrion, peroxisome, plastid	47.69	8.33
PGSC0003DMT400007644	Potato	extracellular, mitochondrion	40.0	8.28
TraesCS2A01G311200.3	Wheat	mitochondrion	46.15	8.2
Zm00001d003584_P001	Maize	extracellular	49.23	8.18
TraesCS6B01G353200.2	Wheat	plastid	46.15	8.11
PGSC0003DMT400080542	Potato	extracellular	13.85	7.96
PGSC0003DMT400048331	Potato	mitochondrion	35.38	6.59
HORVU2Hr1G077220.22	Barley	cytosol, peroxisome, plastid	43.08	6.51
CDY28613	Canola	golgi, plastid, vacuole	38.46	6.48
PGSC0003DMT400079356	Potato	plastid	38.46	6.25
PGSC0003DMT400064103	Potato	cytosol, nucleus, peroxisome, plastid	29.23	6.17
TraesCS2B01G328100.1	Wheat	plastid	33.85	5.98
PGSC0003DMT400072012	Potato	cytosol	12.31	5.44
PGSC0003DMT400048325	Potato	cytosol	7.69	3.85
PGSC0003DMT400048327	Potato	cytosol	9.23	3.35
PGSC0003DMT400055707	Potato	peroxisome	15.38	2.6
PGSC0003DMT400048328	Potato	cytosol	6.15	2.17
HORVU6Hr1G078850.1	Barley	cytosol, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400082779	EnsemblPlantsGene:PGSC0003DMG400032813	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824	InterPro:Aldolase_TIM
InterPro:IPR013785	PANTHER:PTHR22893	PANTHER:PTHR22893:SF44	PGSC:PGSC0003DMG400032813	SUPFAM:SSF51395	UniParc:UPI0002951A2C
UniProt:M1D686	MapMan:50.1.3	:	:	:	:

Description

12-oxophytodienoate reductase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400032813]

Coordinates

chr00:+:42122314..42122674

Molecular Weight (calculated)

7816.8 Da

IEP (calculated)

10.290

GRAVY (calculated)

-0.172

Length

65 amino acids

Sequence
(BLAST)

1: MENKVVEEKQ HMNIPLMIPY KMGNFHLSHR VVLAPLSRQR SYGNVFFQLH MLYFITHKEL QKVAF

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.