CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	73.17	33.52
CDY31095	Canola	plastid	93.9	20.53
GSMUA_Achr6P17440_001	Banana	cytosol	71.95	18.38
CDY21723	Canola	cytosol, mitochondrion, peroxisome	76.83	17.36
CDY45941	Canola	plastid	78.05	17.2
CDY20395	Canola	cytosol, mitochondrion, peroxisome	76.83	16.94
KRH13220	Soybean	mitochondrion, peroxisome, plastid	73.17	16.62
CDX69416	Canola	mitochondrion, plastid	75.61	16.58
CDX81857	Canola	cytosol	74.39	16.44
VIT_18s0041g02040.t01	Wine grape	cytosol	67.07	16.18
CDY16975	Canola	mitochondrion, plastid	73.17	16.09
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	73.17	15.83
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	73.17	15.83
VIT_18s0041g02050.t01	Wine grape	mitochondrion	67.07	15.8
KRH20560	Soybean	mitochondrion	70.73	15.8
AT1G09400.1	Thale cress	mitochondrion	60.98	15.43
VIT_18s0041g02010.t01	Wine grape	cytosol	68.29	15.09
VIT_18s0041g02020.t01	Wine grape	cytosol	69.51	15.04
VIT_18s0041g02070.t01	Wine grape	mitochondrion	67.07	14.78
CDY47292	Canola	mitochondrion, plastid	52.44	14.05
CDY50415	Canola	peroxisome	52.44	11.05
CDX93099	Canola	peroxisome	52.44	11.05
CDY28613	Canola	golgi, plastid, vacuole	10.98	2.33
CDY32175	Canola	plastid	0.0	0.0
VIT_18s0041g02270.t01	Wine grape	vacuole	0.0	0.0

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078H443	UniProt:A0A078H443	InterPro:Aldolase_TIM	EnsemblPlants:CDY32174
ProteinID:CDY32174	ProteinID:CDY32174.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00051552001
InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395
UniParc:UPI0004EEF8C4	:	:	:	:	:

Description

BnaCnng06830DBnaCnng06830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H443]

Coordinates

chrLK032288:-:225530..225778

Molecular Weight (calculated)

9278.8 Da

IEP (calculated)

4.709

GRAVY (calculated)

-0.489

Length

82 amino acids

Sequence
(BLAST)

1: MRKVFEGTFI VAGGYTREDG NKAVAEGRTD LVAYGRLFLA NPDLPRRFQL DAPLNKYDRT SFYTSSDSVV GYTDYPFLET EP

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.