CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

cytosol 3
mitochondrion 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20560	Soybean	mitochondrion	89.75	88.28
KRH63555	Soybean	mitochondrion	17.73	83.12
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	38.23	77.09
CDY32174	Canola	cytosol, peroxisome, plastid	16.62	73.17
KRG94044	Soybean	cytosol	72.58	71.78
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	74.52	70.98
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	73.68	70.18
VIT_18s0041g02050.t01	Wine grape	mitochondrion	67.31	69.83
KRH27669	Soybean	mitochondrion, plastid	71.75	69.81
VIT_18s0041g02070.t01	Wine grape	mitochondrion	71.75	69.62
VIT_18s0041g02010.t01	Wine grape	cytosol	70.91	69.0
VIT_18s0041g02020.t01	Wine grape	cytosol	72.02	68.6
AT1G09400.1	Thale cress	mitochondrion	61.22	68.21
Bra030773.1-P	Field mustard	plastid	68.7	66.13
CDY31095	Canola	plastid	68.7	66.13
GSMUA_Achr6P17440_001	Banana	cytosol	58.73	66.04
KRH77822	Soybean	nucleus	73.13	65.67
VIT_18s0041g02040.t01	Wine grape	cytosol	61.22	65.0
CDY32175	Canola	plastid	45.71	64.96
KRH51591	Soybean	cytosol	67.04	64.53
VIT_18s0041g02270.t01	Wine grape	vacuole	28.25	61.08
Bra030774.1-P	Field mustard	plastid	19.94	60.0
KRH05151	Soybean	nucleus	58.45	59.94
KRH17523	Soybean	cytosol	63.43	58.27
KRH51594	Soybean	cytosol	11.91	55.13
KRH02618	Soybean	mitochondrion	53.74	50.92
KRH19303	Soybean	nucleus	54.29	49.25
KRH02619	Soybean	nucleus	54.29	49.25
KRH19304	Soybean	mitochondrion, plastid	52.91	49.23
KRH06010	Soybean	mitochondrion	20.22	41.48

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EMBL:ACUP02009671	InterPro:Aldolase_TIM	EnsemblPlantsGene:GLYMA_15G223900	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	UniProt:I1MII7
InterPro:IPR013785	EnsemblPlants:KRH13220	ProteinID:KRH13220	ProteinID:KRH13220.1	InterPro:OxRdtase_FMN_N	PFAM:PF00724
PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395	UniParc:UPI000233B74E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:40781411..40784351

Molecular Weight (calculated)

40333.8 Da

IEP (calculated)

6.996

GRAVY (calculated)

-0.409

Length

361 amino acids

Sequence
(BLAST)

001: MAEQKNHVIP LLTPYGMGNF NLSHRIVLAP LFRARSYNNV AQPHAILYYS QRATKGGLLI TEANSISPTC QYHPNAVGIW SKEQIEAWKP IVDAVHAKGG
101: IFFCQILHTG RVSDPDFKPN RQTLISSTNK PLTHNGIEPR ALRTDEIPHI VNDFRLAARN AIEAGFDGVE IHGAHGFLID QFLKDQVNDR TDKYGGSTEN
201: RCRFALEVVE AVVEEIGADR VGIRLSPFSD YNECNDSNPQ ALGLYMAKSL NKHGVLYCHM VEPRWDISGE NKETPHTLAP MKKAFNGTFI VAGGYDRKEG
301: NKAVAEEKAN LVAYGRLFLA NPDLPKRFEV DAPLNKYNRE TFYTPDPVVG YTDYPFLEGS S

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.