Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048327 | Potato | cytosol | 80.45 | 80.45 |
| PGSC0003DMT400048325 | Potato | cytosol | 56.42 | 77.69 |
| CDY32174 | Canola | cytosol, peroxisome, plastid | 33.52 | 73.17 |
| PGSC0003DMT400048328 | Potato | cytosol | 68.16 | 66.3 |
| PGSC0003DMT400080542 | Potato | extracellular | 34.64 | 54.87 |
| VIT_18s0041g02060.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 98.32 | 46.44 |
| VIT_18s0041g02080.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 93.3 | 44.06 |
| VIT_18s0041g02020.t01 | Wine grape | cytosol | 92.74 | 43.8 |
| VIT_18s0041g02050.t01 | Wine grape | mitochondrion | 83.8 | 43.1 |
| PGSC0003DMT400072012 | Potato | cytosol | 35.2 | 42.86 |
| VIT_18s0041g02040.t01 | Wine grape | cytosol | 81.01 | 42.65 |
| VIT_18s0041g02070.t01 | Wine grape | mitochondrion | 84.36 | 40.59 |
| PGSC0003DMT400048331 | Potato | mitochondrion | 78.77 | 40.4 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 79.89 | 40.4 |
| VIT_18s0041g02010.t01 | Wine grape | cytosol | 82.12 | 39.62 |
| Solyc11g032230.1.1 | Tomato | cytosol | 72.07 | 39.45 |
| PGSC0003DMT400048344 | Potato | cytosol | 80.45 | 38.5 |
| KRH13220 | Soybean | mitochondrion, peroxisome, plastid | 77.09 | 38.23 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 63.13 | 37.92 |
| Solyc10g086220.1.1 | Tomato | extracellular | 78.21 | 37.23 |
| CDY21723 | Canola | cytosol, mitochondrion, peroxisome | 74.3 | 36.64 |
| Bra031012.1-P | Field mustard | cytosol | 74.86 | 36.12 |
| AT1G76690.1 | Thale cress | cytoskeleton, mitochondrion, peroxisome | 75.42 | 36.1 |
| KRH20560 | Soybean | mitochondrion | 73.74 | 35.97 |
| AT1G09400.1 | Thale cress | mitochondrion | 64.8 | 35.8 |
| CDX81857 | Canola | cytosol | 73.18 | 35.31 |
| CDY20395 | Canola | cytosol, mitochondrion, peroxisome | 72.07 | 34.68 |
| CDY31095 | Canola | plastid | 72.63 | 34.67 |
| Bra030773.1-P | Field mustard | plastid | 72.63 | 34.67 |
| CDX69416 | Canola | mitochondrion, plastid | 72.07 | 34.49 |
| Bra008591.1-P | Field mustard | plastid | 72.07 | 34.49 |
| CDY45941 | Canola | plastid | 71.51 | 34.41 |
| Bra008271.1-P | Field mustard | peroxisome | 71.51 | 34.22 |
| CDY16975 | Canola | mitochondrion, plastid | 70.39 | 33.78 |
| AT1G76680.2 | Thale cress | peroxisome | 74.3 | 33.5 |
| VIT_18s0122g01170.t01 | Wine grape | cytoskeleton, mitochondrion, peroxisome | 68.72 | 32.89 |
| VIT_18s0122g01160.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 65.36 | 31.28 |
| GSMUA_Achr6P17440_001 | Banana | cytosol | 48.6 | 27.1 |
| CDY47292 | Canola | mitochondrion, plastid | 43.02 | 25.16 |
| VIT_11s0016g01230.t01 | Wine grape | plastid | 53.07 | 23.87 |
| AT1G18020.1 | Thale cress | mitochondrion, peroxisome, plastid | 31.84 | 21.19 |
| AT1G17990.1 | Thale cress | mitochondrion, peroxisome, plastid | 31.84 | 21.19 |
| CDY32175 | Canola | plastid | 26.26 | 18.5 |
| Bra030774.1-P | Field mustard | plastid | 0.0 | 0.0 |
| VIT_18s0041g02090.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| VIT_18s0041g02270.t01 | Wine grape | vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.3 | InterPro:Aldolase_TIM | ProteinID:CCB61620 | ProteinID:CCB61620.1 | UniProt:F6I440 |
| EMBL:FN596744 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:IPR013785 | InterPro:OxRdtase_FMN_N | PFAM:PF00724 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 |
| SUPFAM:SSF51395 | UniParc:UPI0002109445 | ArrayExpress:VIT_18s0041g02260 | EnsemblPlantsGene:VIT_18s0041g02260 | EnsemblPlants:VIT_18s0041g02260.t01 | : |
Description
No Description!
Coordinates
chr18:-:27385437..27386055
Molecular Weight (calculated)
20147.8 Da
IEP (calculated)
4.775
GRAVY (calculated)
-0.468
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDQVNDRTD KYGGSLENRC RFPLEVVEAV VDEIGADKVG IRLSPFATYA EAGDSNPRAL GLYMAESLNK YGLLYCHMVE PRMKTLGEKS ECAHSLLPMR
101: KAFNGTFLVA GGYDREDGNN AVAENRADLV VYGRWFLANP DLPKRFALNA PLNKYNRETF YTPDPIVGYT DYPFLEDTE
101: KAFNGTFLVA GGYDREDGNN AVAENRADLV VYGRWFLANP DLPKRFALNA PLNKYNRETF YTPDPIVGYT DYPFLEDTE
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.