CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008591.1-P	Field mustard	plastid	99.73	99.73
CDY16975	Canola	mitochondrion, plastid	96.26	96.51
CDY20395	Canola	cytosol, mitochondrion, peroxisome	91.98	92.47
CDY45941	Canola	plastid	91.18	91.67
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	83.96	83.96
AT1G76680.2	Thale cress	peroxisome	88.5	83.38
Solyc11g032130.1.1	Tomato	mitochondrion	73.53	77.68
PGSC0003DMT400048327	Potato	cytosol	36.9	77.09
CDY32174	Canola	cytosol, peroxisome, plastid	16.58	75.61
PGSC0003DMT400048331	Potato	mitochondrion	70.32	75.36
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	75.94	74.93
PGSC0003DMT400048344	Potato	cytosol	74.6	74.6
Solyc10g086220.1.1	Tomato	extracellular	73.8	73.4
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	74.33	73.35
VIT_18s0041g02270.t01	Wine grape	vacuole	32.62	73.05
VIT_18s0041g02070.t01	Wine grape	mitochondrion	72.46	72.85
CDY21723	Canola	cytosol, mitochondrion, peroxisome	70.59	72.73
VIT_18s0041g02050.t01	Wine grape	mitochondrion	67.65	72.7
PGSC0003DMT400048325	Potato	cytosol	25.13	72.31
VIT_18s0041g02010.t01	Wine grape	cytosol	71.66	72.24
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	34.49	72.07
VIT_18s0041g02020.t01	Wine grape	cytosol	72.19	71.24
Solyc11g032230.1.1	Tomato	cytosol	61.76	70.64
CDY31095	Canola	plastid	70.32	70.13
CDX81857	Canola	cytosol	69.52	70.08
CDY32175	Canola	plastid	47.33	69.69
PGSC0003DMT400048328	Potato	cytosol	34.22	69.57
GSMUA_Achr6P17440_001	Banana	cytosol	58.56	68.22
VIT_18s0041g02040.t01	Wine grape	cytosol	60.7	66.76
CDY47292	Canola	mitochondrion, plastid	52.67	64.38
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.07	64.09
PGSC0003DMT400080542	Potato	extracellular	17.91	59.29
CDX93099	Canola	peroxisome	51.6	49.61
CDY50415	Canola	peroxisome	51.34	49.36
PGSC0003DMT400072012	Potato	cytosol	17.91	45.58
CDY28613	Canola	golgi, plastid, vacuole	27.27	26.42

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078BX80	InterPro:Aldolase_TIM	EnsemblPlants:CDX69416	ProteinID:CDX69416
ProteinID:CDX69416.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135385001	InterPro:IPR013785
InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395	UniParc:UPI0004EDCDFE

Description

BnaA10g17650D

Coordinates

chrLK031790:+:124109..125972

Molecular Weight (calculated)

41570.4 Da

IEP (calculated)

6.439

GRAVY (calculated)

-0.359

Length

374 amino acids

Sequence
(BLAST)

001: MENVVTKQSI PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAVLYY AQRTTPGSLL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVEAVHAKG
101: GIIFCQIWHV GRVSNKSFQP NGQAPISCTD KPLMPQIRSN GIDEAMFTPP RRLSTEEIPT IVNHFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFALDIV EAVANEIGPD RVGIRLSPFA DYMESGDTNP QALALHMAES LNKYGILYCH VVEARMKTMG EITECHPHTL TPMRKAFSGT
301: FIAAGGFKRE DGNEAVDKGR TDLVAYGRLF LANPDLPKRF EVDAELNKYD RSTFYTSDPV VGYTDYPFLD STAS

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.