CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31095	Canola	plastid	90.94	61.6
AT1G09400.1	Thale cress	mitochondrion	76.77	60.19
VIT_18s0041g02270.t01	Wine grape	vacuole	38.19	58.08
CDY45941	Canola	plastid	70.47	48.12
CDY20395	Canola	cytosol, mitochondrion, peroxisome	70.08	47.85
CDY16975	Canola	mitochondrion, plastid	70.08	47.72
GSMUA_Achr6P17440_001	Banana	cytosol	60.24	47.66
CDX69416	Canola	mitochondrion, plastid	69.69	47.33
CDY21723	Canola	cytosol, mitochondrion, peroxisome	67.32	47.11
VIT_18s0041g02070.t01	Wine grape	mitochondrion	67.32	45.97
KRH13220	Soybean	mitochondrion, peroxisome, plastid	64.96	45.71
VIT_18s0041g02010.t01	Wine grape	cytosol	66.54	45.55
CDX81857	Canola	cytosol	66.54	45.55
VIT_18s0041g02050.t01	Wine grape	mitochondrion	62.2	45.4
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	67.32	45.12
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	66.54	44.59
KRH20560	Soybean	mitochondrion	62.99	43.6
VIT_18s0041g02020.t01	Wine grape	cytosol	64.96	43.54
VIT_18s0041g02040.t01	Wine grape	cytosol	53.15	39.71
CDY50415	Canola	peroxisome	51.57	33.68
CDX93099	Canola	peroxisome	51.18	33.42
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	18.5	26.26
CDY47292	Canola	mitochondrion, plastid	29.92	24.84
CDY28613	Canola	golgi, plastid, vacuole	30.32	19.95
CDY32174	Canola	cytosol, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078H0G5	UniProt:A0A078H0G5	InterPro:Aldolase_TIM	EnsemblPlants:CDY32175
ProteinID:CDY32175	ProteinID:CDY32175.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00051553001
InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395
UniParc:UPI0004EF2BC7	:	:	:	:	:

Description

BnaCnng06840DBnaCnng06840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0G5]

Coordinates

chrLK032288:-:225868..227205

Molecular Weight (calculated)

28088.1 Da

IEP (calculated)

5.310

GRAVY (calculated)

-0.339

Length

254 amino acids

Sequence
(BLAST)

001: MENSATNQTI PLLTPFSMRN FNLSHRIVMA PMARMRSYGS IPQPHAALYY SERATPGGLL ISEATGVSET AMAYHDMPGI WTKNQIEAWK PIVDAVHSNG
101: AVFFCQLWHA GRVSHRDSQP NGDAPISSTD KPLADDSSNE FTPPIRLRID EIPNVVNDFR LAARNAIEAG FDGVEIHGAH GYLIDQFMKD TVNDRTDCYG
201: GSLENRCRFA LEVIEAVTSE IGSDRVGVRL SPFANYMESG DTEPQKLGVS WRSL

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.