CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63555	Soybean	mitochondrion	19.35	92.21
KRH13220	Soybean	mitochondrion, peroxisome, plastid	88.28	89.75
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	35.97	73.74
CDY32174	Canola	cytosol, peroxisome, plastid	15.8	70.73
KRG94044	Soybean	cytosol	67.03	67.4
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	68.39	66.23
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	67.85	65.7
VIT_18s0041g02050.t01	Wine grape	mitochondrion	62.13	65.52
VIT_18s0041g02070.t01	Wine grape	mitochondrion	66.21	65.32
VIT_18s0041g02020.t01	Wine grape	cytosol	67.3	65.17
AT1G09400.1	Thale cress	mitochondrion	57.49	65.12
VIT_18s0041g02010.t01	Wine grape	cytosol	64.85	64.15
KRH27669	Soybean	mitochondrion, plastid	64.85	64.15
Bra030773.1-P	Field mustard	plastid	65.4	64.0
CDY31095	Canola	plastid	65.4	64.0
GSMUA_Achr6P17440_001	Banana	cytosol	55.31	63.24
CDY32175	Canola	plastid	43.6	62.99
KRH51591	Soybean	cytosol	64.03	62.67
VIT_18s0041g02040.t01	Wine grape	cytosol	56.4	60.88
KRH77822	Soybean	nucleus	66.48	60.7
KRH05151	Soybean	nucleus	56.68	59.09
Bra030774.1-P	Field mustard	plastid	19.07	58.33
KRH17523	Soybean	cytosol	60.76	56.74
VIT_18s0041g02270.t01	Wine grape	vacuole	24.8	54.49
KRH51594	Soybean	cytosol	11.17	52.56
KRH02618	Soybean	mitochondrion	52.86	50.92
KRH19304	Soybean	mitochondrion, plastid	51.23	48.45
KRH19303	Soybean	nucleus	52.32	48.24
KRH02619	Soybean	nucleus	52.32	48.24
KRH06010	Soybean	mitochondrion	19.35	40.34

Protein Annotations

EntrezGene:100797662	Gene3D:3.20.20.70	MapMan:50.1.3	EMBL:ACUP02008280	InterPro:Aldolase_TIM	EMBL:BT095720
UniProt:C6TDQ8	EnsemblPlantsGene:GLYMA_13G186200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	EnsemblPlants:KRH20560	ProteinID:KRH20560	ProteinID:KRH20560.1
InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395	UniParc:UPI0001B16807
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:29990952..29993554

Molecular Weight (calculated)

41008.6 Da

IEP (calculated)

6.377

GRAVY (calculated)

-0.365

Length

367 amino acids

Sequence
(BLAST)

001: MVEQKNQVIP LLTPYRMGNL NLSHRIVLAP LFRARSYNNV AQPHAILYYS QRATKGGLLI TEATTISPTS KYHPNAVGIW SREQIEAWKP IVDAVHAKGG
101: IFFCQIVHTG RAYDPDLKPD GQTLISSTNK PFTHNATEPT ALRTAEIPDI VNEFRLAARN AIEAGFDGVE IHGAHGFLID QFLKDQVNDR TDKYGGSLEN
201: RCRFALEVVE AVVEEIGADR VGMRLSPFSD FNECSDSNPQ ALGLYMAKSL SKHGVLYCHM VEPRWDISGE NKETLHTLSP MKKAFDGTFI VAGGYDREEG
301: NKAVTADKAN LVAYGRLFLA NPDLPKRFEV DEPLNKYNRD TFYTPDPVVG YTDYPFLEGS VLKDHMN

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.