CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69416	Canola	mitochondrion, plastid	96.51	96.26
CDY20395	Canola	cytosol, mitochondrion, peroxisome	91.42	91.67
CDY45941	Canola	plastid	90.88	91.13
AT1G76690.1	Thale cress	cytoskeleton, mitochondrion, peroxisome	83.65	83.42
AT1G76680.2	Thale cress	peroxisome	88.74	83.38
Solyc11g032130.1.1	Tomato	mitochondrion	71.58	75.42
PGSC0003DMT400048327	Potato	cytosol	35.92	74.86
VIT_18s0041g02270.t01	Wine grape	vacuole	33.24	74.25
VIT_18s0041g02080.t01	Wine grape	cytosol, mitochondrion, peroxisome	75.07	73.88
PGSC0003DMT400048331	Potato	mitochondrion	68.9	73.64
PGSC0003DMT400048344	Potato	cytosol	73.46	73.26
CDY32174	Canola	cytosol, peroxisome, plastid	16.09	73.17
VIT_18s0041g02060.t01	Wine grape	cytoskeleton, cytosol, peroxisome	73.99	72.82
VIT_18s0041g02050.t01	Wine grape	mitochondrion	67.56	72.41
VIT_18s0041g02070.t01	Wine grape	mitochondrion	72.12	72.31
Solyc10g086220.1.1	Tomato	extracellular	72.65	72.07
VIT_18s0041g02010.t01	Wine grape	cytosol	71.58	71.97
CDY21723	Canola	cytosol, mitochondrion, peroxisome	69.44	71.35
VIT_18s0041g02020.t01	Wine grape	cytosol	71.58	70.45
VIT_18s0041g02260.t01	Wine grape	cytosol, peroxisome, plastid	33.78	70.39
CDY32175	Canola	plastid	47.72	70.08
PGSC0003DMT400048325	Potato	cytosol	24.4	70.0
CDY31095	Canola	plastid	69.97	69.6
Solyc11g032230.1.1	Tomato	cytosol	60.86	69.42
CDX81857	Canola	cytosol	68.63	69.0
GSMUA_Achr6P17440_001	Banana	cytosol	59.25	68.85
PGSC0003DMT400048328	Potato	cytosol	33.24	67.39
VIT_18s0041g02040.t01	Wine grape	cytosol	60.32	66.18
CDY47292	Canola	mitochondrion, plastid	52.81	64.38
Solyc11g032220.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.13	62.75
PGSC0003DMT400080542	Potato	extracellular	17.16	56.64
CDX93099	Canola	peroxisome	50.13	48.07
CDY50415	Canola	peroxisome	49.87	47.81
PGSC0003DMT400072012	Potato	cytosol	17.43	44.22
CDY28613	Canola	golgi, plastid, vacuole	26.81	25.91

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	GO:A0A078FR63	UniProt:A0A078FR63	InterPro:Aldolase_TIM	EnsemblPlants:CDY16975
ProteinID:CDY16975	ProteinID:CDY16975.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00094910001
InterPro:IPR013785	InterPro:OxRdtase_FMN_N	PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF88	SUPFAM:SSF51395
UniParc:UPI0004EDF71A	:	:	:	:	:

Description

BnaC09g41020DBnaC09g41020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR63]

Coordinates

chrLK032068:+:661592..663450

Molecular Weight (calculated)

41286.1 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.325

Length

373 amino acids

Sequence
(BLAST)

001: MENVVTKQSI PLLAPYKMGR FNLSHRIVLA PLTRQRSYGN VPQPHAVLYY AQRTTPGGLL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIIFCQIWHV GRVSNKGFQP NGQAPISCTD KPLMPQIRSN GIDEAMFTPP RRLSTEEIPT IVSHFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVNN
201: RTDEYGGSLQ NRCKFALDIV EAVANEIGPD RVGIRLSPFA DYMESGDTNP QALAVHMAES LNKYGILYCH VIEARMKTMG EVTECPHTLT PMRKAFSGTF
301: IAAGGFKRED GNEAVDKGRT DLVAYGRWFL ANPDLPKRFE VDAALNKYDR STFYASDPVV GYTDYPFLDS TAS

Best Arabidopsis Sequence Match ( AT1G76680.1 )
(BLAST)

001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA

Arabidopsis Description

OPR112-oxophytodienoate reductase 1 [Source:UniProtKB/TrEMBL;Acc:F4I403]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.