Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G17990.1 | Thale cress | mitochondrion, peroxisome, plastid | 100.0 | 100.0 |
| CDY21723 | Canola | cytosol, mitochondrion, peroxisome | 83.64 | 61.98 |
| CDX81857 | Canola | cytosol | 84.76 | 61.46 |
| Bra031012.1-P | Field mustard | cytosol | 84.39 | 61.19 |
| VIT_18s0041g02270.t01 | Wine grape | vacuole | 37.17 | 59.88 |
| HORVU6Hr1G078850.1 | Barley | cytosol, peroxisome | 10.04 | 56.25 |
| AT1G09400.1 | Thale cress | mitochondrion | 65.06 | 54.01 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 68.4 | 51.98 |
| PGSC0003DMT400048331 | Potato | mitochondrion | 64.68 | 49.86 |
| AT1G76690.1 | Thale cress | cytoskeleton, mitochondrion, peroxisome | 69.14 | 49.73 |
| PGSC0003DMT400048344 | Potato | cytosol | 69.14 | 49.73 |
| TraesCS2A01G311200.3 | Wheat | mitochondrion | 67.66 | 49.73 |
| Solyc10g086220.1.1 | Tomato | extracellular | 69.14 | 49.47 |
| TraesCS6D01G302300.2 | Wheat | plastid | 68.03 | 49.46 |
| KXG26382 | Sorghum | cytoskeleton, cytosol, peroxisome | 67.66 | 49.19 |
| TraesCS2D01G309400.1 | Wheat | plastid | 67.29 | 48.92 |
| GSMUA_Achr6P17440_001 | Banana | cytosol | 58.36 | 48.91 |
| VIT_18s0041g02070.t01 | Wine grape | mitochondrion | 67.29 | 48.66 |
| TraesCS6B01G464800.1 | Wheat | mitochondrion, peroxisome, plastid | 67.29 | 48.66 |
| TraesCS6B01G353200.2 | Wheat | plastid | 66.91 | 48.65 |
| VIT_18s0041g02080.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 68.4 | 48.55 |
| VIT_18s0041g02060.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 68.03 | 48.28 |
| KXG26381 | Sorghum | plastid | 61.34 | 48.1 |
| VIT_18s0041g02010.t01 | Wine grape | cytosol | 66.17 | 47.98 |
| KXG26383 | Sorghum | plastid | 66.54 | 47.73 |
| VIT_18s0041g02050.t01 | Wine grape | mitochondrion | 61.34 | 47.41 |
| Zm00001d003584_P001 | Maize | extracellular | 68.4 | 47.06 |
| VIT_18s0041g02020.t01 | Wine grape | cytosol | 66.17 | 46.97 |
| AT1G76680.2 | Thale cress | peroxisome | 68.77 | 46.6 |
| TraesCS2B01G328100.1 | Wheat | plastid | 63.57 | 46.47 |
| Solyc11g032230.1.1 | Tomato | cytosol | 53.9 | 44.34 |
| HORVU2Hr1G077220.22 | Barley | cytosol, peroxisome, plastid | 66.91 | 41.86 |
| OQU79576 | Sorghum | plastid | 23.79 | 41.56 |
| VIT_18s0041g02040.t01 | Wine grape | cytosol | 52.42 | 41.47 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 45.35 | 40.94 |
| Os01t0369900-01 | Rice | cytosol | 25.28 | 37.57 |
| PGSC0003DMT400048328 | Potato | cytosol | 24.54 | 35.87 |
| PGSC0003DMT400048327 | Potato | cytosol | 23.42 | 35.2 |
| AT2G06050.1 | Thale cress | cytosol, plastid | 50.93 | 35.04 |
| VIT_18s0041g02260.t01 | Wine grape | cytosol, peroxisome, plastid | 21.19 | 31.84 |
| PGSC0003DMT400080542 | Potato | extracellular | 8.55 | 20.35 |
| PGSC0003DMT400048325 | Potato | cytosol | 7.43 | 15.38 |
| PGSC0003DMT400072012 | Potato | cytosol | 3.35 | 6.12 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.3 | EntrezGene:838379 | EntrezGene:838382 | ProteinID:AAF97278.1 | ProteinID:AAF97820.1 |
| ProteinID:AEE29660.1 | ProteinID:AEE29664.1 | EMBL:AF344314 | EMBL:AK118160 | ArrayExpress:AT1G18020 | EnsemblPlantsGene:AT1G18020 |
| RefSeq:AT1G18020 | TAIR:AT1G18020 | RefSeq:AT1G18020-TAIR-G | EnsemblPlants:AT1G18020.1 | TAIR:AT1G18020.1 | EMBL:AY063976 |
| InterPro:Aldolase_TIM | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010181 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:IPR013785 | RefSeq:NP_173241.2 | RefSeq:NP_849683.1 | InterPro:OxRdtase_FMN_N | UniProt:P0DI08 |
| UniProt:P0DI09 | PFAM:PF00724 | PO:PO:0000293 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | SUPFAM:SSF51395 |
| UniParc:UPI00000AC05D | : | : | : | : | : |
Description
Putative 12-oxophytodienoate reductase-like protein 2B [Source:UniProtKB/Swiss-Prot;Acc:P0DI09]
Coordinates
chr1:+:6202235..6204234
Molecular Weight (calculated)
29974.7 Da
IEP (calculated)
6.398
GRAVY (calculated)
-0.368
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: METKQSIPLL MPYKMGPFNL SHRVVLAPLT RSRSYGNIPQ PNAKLYYTQR TTPGGLLISE SCVVSETSLG YPDLPGLWNR DQVEAWKPIV DAVHSKGGIF
101: FCQIWHGGRV FHQDQPNGEA PVSSTDKPLM CKNMYGGQFK PPRRLRSDEL PAIVNDFRIA ARNAIEAGFD GVEVHGAHGY LIDQFLKDKV NDRSDQYGGS
201: LENRCRFALE VIEAVVNEIG SDRVGIRLSP FADYMESGDS NPEALGLYLV QAMNKHGMES STVTWLNLE
101: FCQIWHGGRV FHQDQPNGEA PVSSTDKPLM CKNMYGGQFK PPRRLRSDEL PAIVNDFRIA ARNAIEAGFD GVEVHGAHGY LIDQFLKDKV NDRSDQYGGS
201: LENRCRFALE VIEAVVNEIG SDRVGIRLSP FADYMESGDS NPEALGLYLV QAMNKHGMES STVTWLNLE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.