Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g039930.2.1 | Tomato | cytosol | 22.86 | 45.9 |
| Solyc01g103390.2.1 | Tomato | plastid | 56.33 | 38.87 |
| Solyc11g032130.1.1 | Tomato | mitochondrion | 55.1 | 38.14 |
| Solyc09g098320.1.1 | Tomato | mitochondrion | 23.67 | 35.58 |
| Solyc10g086220.1.1 | Tomato | extracellular | 52.24 | 34.04 |
| Solyc11g032220.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.41 | 33.22 |
| Solyc11g032230.1.1 | Tomato | cytosol | 42.04 | 31.5 |
| Solyc07g007870.2.1 | Tomato | plastid | 45.71 | 28.28 |
| Solyc04g039920.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 3.67 | 10.34 |
Protein Annotations
| Gene3D:3.20.20.70 | MapMan:50.1.3 | InterPro:Aldolase_TIM | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0010181 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR013785 | UniProt:K4BRC9 | InterPro:OxRdtase_FMN_N |
| PFAM:PF00724 | PANTHER:PTHR22893 | PANTHER:PTHR22893:SF88 | SUPFAM:SSF51395 | EnsemblPlantsGene:Solyc04g039910.1 | EnsemblPlants:Solyc04g039910.1.1 |
| UniParc:UPI0002766017 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:12388330..12389718
Molecular Weight (calculated)
27523.3 Da
IEP (calculated)
4.562
GRAVY (calculated)
-0.344
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTVSELKNF TNSEPDLRPS STTKDQTEAW KPIVDSVHGK GGVFFCQLWH LGRLSDSTLN NFIMFWNYLK TPKQLKANEI PIIVNDFRIA ARNAIEVGFD
101: GVEINSAISY IIDQFLNDQV NDKTDEYGGS IENRCRLALK IVGEVVDEIG SDRVDVKLSL FSEVYGKKDS NPEFLSTYLE CIASDGYNKT NGDEAVTESY
201: ADLVSFGRLF LANPDLPKRF EANAPLNKHD RSTFFKTDPV VEISC
101: GVEINSAISY IIDQFLNDQV NDKTDEYGGS IENRCRLALK IVGEVVDEIG SDRVDVKLSL FSEVYGKKDS NPEFLSTYLE CIASDGYNKT NGDEAVTESY
201: ADLVSFGRLF LANPDLPKRF EANAPLNKHD RSTFFKTDPV VEISC
001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK
Arabidopsis Description
Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.