Factsheet for Zm00001d037182_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89418	Sorghum	cytosol	86.74	86.74
Zm00001d044906_P001	Maize	mitochondrion, peroxisome, plastid	77.19	78.02
Zm00001d044908_P001	Maize	mitochondrion, peroxisome, plastid	77.72	77.93
GSMUA_Achr2P20800_001	Banana	mitochondrion	67.11	69.32
GSMUA_Achr2P20790_001	Banana	mitochondrion	55.17	68.87
Zm00001d011097_P001	Maize	cytosol	66.05	65.01
Zm00001d040842_P001	Maize	cytoskeleton, cytosol, peroxisome	61.54	62.37
KRH51591	Soybean	cytosol	61.01	61.33
VIT_18s0122g01170.t01	Wine grape	cytoskeleton, mitochondrion, peroxisome	59.42	59.89
Zm00001d003584_P001	Maize	extracellular	61.8	59.59
VIT_18s0122g01160.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.29	57.75
KRH17523	Soybean	cytosol	57.82	55.47
KRH05151	Soybean	nucleus	51.72	55.4
Zm00001d050107_P001	Maize	extracellular, mitochondrion	53.32	50.38
Zm00001d032049_P002	Maize	extracellular, mitochondrion	53.05	50.13
KRH06010	Soybean	mitochondrion	17.77	38.07

Protein Annotations

Gene3D:3.20.20.70	MapMan:50.1.3	EntrezGene:732731	ProteinID:AQK83243.1	EMBL:AY921640	InterPro:Aldolase_TIM
EMBL:BT034258	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016491	GO:GO:0055114	InterPro:IPR013785	InterPro:OxRdtase_FMN_N
PFAM:PF00724	PANTHER:PTHR22893	PANTHER:PTHR22893:SF44	UniProt:Q49HE2	SUPFAM:SSF51395	UniParc:UPI000057C567
EnsemblPlantsGene:Zm00001d037182	EnsemblPlants:Zm00001d037182_P001	EnsemblPlants:Zm00001d037182_T001	:	:	:

Description

12-oxo-phytodienoic acid reductase3 12-oxo-phytodienoic acid reductase3

Coordinates

chr6:-:114979500..114981186

Molecular Weight (calculated)

41619.1 Da

IEP (calculated)

5.271

GRAVY (calculated)

-0.306

Length

377 amino acids

Sequence
(BLAST)

001: MGHQEQEQEV IPLMTPYKMG QLELSHRVVL APMTRCRAIG DVPQPHAAVY YSQRASRGGV LITEGTGVSA TAQGFPGSPG IWTQEQVAAW KPIVDAVHRK
101: GALFFCQIAH VGRASTNDFQ PDGQAPVSST DAQLPPDAES GTVFSRPRRL RADEVPGIVD DFRRAARNAI EAGFDGVEIH GAHGFLLEQF MKDGANDRAD
201: EYGGSVENRC RFVVEVVDAL VREIGASRVG IRLSPFADYL NCADSNPLAL GHYMVEQLNR HEGFLYCHMV EPRMAIVDDR RQIPHGLLPF KAAFNGTFIA
301: AGGYDREKGN KVVAEGYADL VAYGRLFLAN PDLPKRFEVD EILNKYDRST FYTQDPVVGY TDYPFLRDDS EDLAAQV

Best Arabidopsis Sequence Match ( AT1G09400.1 )
(BLAST)

001: MKNFNLTHRI VMAPMARMRS YGNIPQPHVA LYYCQRTTPG GLLISEATGV SETAMAYQNM PGIWRKEQIE AWKPIVDAVH SHGGIFFCQL WHAGRVSHQD
101: CQPNGESPVS STDKPFADDP SNEFTPPRRL RTDEIPTIIN DFRLAARNAT EAGFDGVEIH GAHGYLIDQF MKDSVNDRTD SYGGSLENRC RFALQVIEAV
201: SKEIGPDRVG IRLSPFADYM ESGDTDPKRL GLYMAKSLNR FEILYCHMIE PRMKTVSEIF ECRESLTPMR NAFNGTFIVA GGYTREDGNK AVAEGRTDLV
301: AYGRLFLANP DLPKRFELNA PLNK

Arabidopsis Description

Putative 12-oxophytodienoate reductase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.