CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19920.1	KRH10294	AT3G46090.1	17259181
AT1G19920.1	KRH23029	AT3G46090.1	17259181
AT1G19920.1	KRH24840	AT3G46090.1	17259181
AT1G19920.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0111200-01	Rice	cytosol, plastid	35.51	87.11
KRH18317	Soybean	nucleus	75.91	85.86
Bra016487.1-P	Field mustard	plastid	59.24	75.87
TraesCS2A01G032500.1	Wheat	cytosol, peroxisome, plastid	56.88	74.76
TraesCS2B01G046500.1	Wheat	cytosol, peroxisome, plastid	56.88	74.76
VIT_18s0001g14010.t01	Wine grape	plastid	63.04	72.05
HORVU2Hr1G004890.5	Barley	cytosol	25.18	71.65
Bra025782.1-P	Field mustard	plastid	61.96	70.81
CDY29382	Canola	plastid	61.78	70.6
AT1G19920.1	Thale cress	plastid	60.87	70.59
CDX83735	Canola	plastid	60.69	69.36
CDY70746	Canola	plastid	60.69	69.36
OQU81103	Sorghum	plastid	57.25	66.67
TraesCS2D01G031800.1	Wheat	plastid	57.07	66.04
Zm00001d004513_P001	Maize	plastid	56.7	65.89
KRH35429	Soybean	plastid	53.99	64.09
KRG91385	Soybean	plastid	53.26	63.09
GSMUA_Achr4P18350_001	Banana	plastid	57.97	62.5
Os04t0111225-00	Rice	plastid	13.41	37.37

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	EMBL:ACUP02011617	InterPro:ATP-Sase_PUA-like_dom	EnsemblPlantsGene:GLYMA_19G037600	GO:GO:0000103	GO:GO:0003674
GO:GO:0003824	GO:GO:0004020	GO:GO:0004781	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1N6H7	InterPro:IPR014729	EnsemblPlants:KRG93746
ProteinID:KRG93746	ProteinID:KRG93746.1	PFAM:PF01747	PFAM:PF14306	PANTHER:PTHR11055	PANTHER:PTHR11055:SF18
InterPro:PUA-like_sf	MetaCyc:PWY-5278	MetaCyc:PWY-5340	MetaCyc:PWY-6683	MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52374	SUPFAM:SSF88697	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	UniParc:UPI00023D9664	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:5250806..5255356

Molecular Weight (calculated)

61678.9 Da

IEP (calculated)

8.123

GRAVY (calculated)

-0.217

Length

552 amino acids

Sequence
(BLAST)

001: MSLSLTIKLH LASSSSFSNF TLNSHHHANK VTTSKTCSNA KIRPKPIYST NPLIIPTCKV RPRVQQHRGT MIKSSLIEPD GGALVDLMVS EGERGAKITE
101: AESLPKVQLT RIDLEWVHVV GEGWASPLRG FMREDEYLQS LHFNSLRVKD GSLVNMSLPI VLAIDDETKE GIGSSSHVGL LGPHGDCVAI LRSSKNLSIE
201: LPYSNCTFCS HVNITIKLEH IDLKFPPCLK LFTHTLEVYF SMFRVFMKDL VDVCGMCIGC YKRGMPMEIE TPKGTTAPGL PYVEEVITPA GNWLIGGDLE
301: VLKPIKYNDG LDNYRLSPKQ LREEFDKRQA DAVFAFQLRN PVHNGRALLM NDTRKRLLEI GFKNPILLLH PLGGFVKADD VPLDVRMEQH SKVLEDGVLD
401: PETTIVAIFP SPMHYVGPTE VQWHAKARID AGANFYIVGR DPTGMGHPTE KRDLYDPDHG KKVLNMAPGL EKLNILPFRV AAYDTKLNKM AFFDPTRAKD
501: FLFIYGTKMR AFAKSGENPP KGFMCPSGWK VLVKYYESLQ AEESSQQPVL ST

Best Arabidopsis Sequence Match ( AT1G19920.1 )
(BLAST)

001: MSLMIRSSYV SHITLFQPRN SKPSSFTNQI SFLSSSNNNP FLNLVYKRNL TMQSVSKMTV KSSLIDPDGG ELVELIVPET EIGVKKAESE TMPKVKLNQI
101: DLEWVHVISE GWASPLKGFM REDEYLQSLH FNSLRLKNGT FVNMSLPIVL AIDDDTKEQI GSSENVALVC PQGDIIGSLR SVEIYKHNKE ERIARTWGTT
201: SPGLPYVEEY ITPSGNWLIG GDLEVFEPIK YNDGLDHYRL SPKQLREEFD NRQADAVFAF QLRNPVHNGH ALLMNDTRKR LLEMGYKNPV LLLHPLGGFT
301: KADDVPLDVR MEQHSKVLED GVLDPKTTIV SIFPSPMHYA GPTEVQWHAK ARINAGANFY IVGRDPAGMG HPTEKRDLYD PDHGKRVLSM APGLEKLNIL
401: PFRVAAYDTI EKKMAFFDPS RAKEFLFISG TKMRTYARTG ENPPDGFMCP SGWNVLVKYY ESLQESEAKQ QAVVSA

Arabidopsis Description

APS2ATP sulfurylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43870]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.