CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0111200-01	Rice	cytosol, plastid	45.15	95.11
Zm00001d004513_P001	Maize	plastid	90.08	89.89
TraesCS2B01G046500.1	Wheat	cytosol, peroxisome, plastid	77.64	87.62
TraesCS2A01G032500.1	Wheat	cytosol, peroxisome, plastid	77.43	87.38
HORVU2Hr1G004890.5	Barley	cytosol	33.97	82.99
TraesCS2D01G031800.1	Wheat	plastid	81.86	81.34
Bra016487.1-P	Field mustard	plastid	68.35	75.17
AT1G19920.1	Thale cress	plastid	69.83	69.54
VIT_18s0001g14010.t01	Wine grape	plastid	70.68	69.36
Bra025782.1-P	Field mustard	plastid	70.25	68.94
KRH18317	Soybean	nucleus	70.46	68.44
GSMUA_Achr4P18350_001	Banana	plastid	73.63	68.16
EER90894	Sorghum	plastid	67.3	65.37
KRG93746	Soybean	plastid	66.67	57.25
CDX96913	Canola	plastid	15.4	54.48
Os04t0111225-00	Rice	plastid	20.89	50.0

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	UniProt:A0A1Z5RBG0	InterPro:ATP-Sase_PUA-like_dom	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824
GO:GO:0004781	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPR014729
EnsemblPlants:OQU81103	ProteinID:OQU81103	ProteinID:OQU81103.1	PFAM:PF01747	PFAM:PF14306	PANTHER:PTHR11055
PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	InterPro:Rossmann-like_a/b/a_fold	EnsemblPlantsGene:SORBI_3006G008700	SUPFAM:SSF52374	SUPFAM:SSF88697
InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	UniParc:UPI000B426C2D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:1295683..1300145

Molecular Weight (calculated)

52201.8 Da

IEP (calculated)

7.584

GRAVY (calculated)

-0.278

Length

474 amino acids

Sequence
(BLAST)

001: MATTHQLTPP HLHHPSASTT PRVRATASLA HPLLLSRRLR LRLAAAPQSR SPCPRRGAMS VRSSLIDPDG GALVELVAPP DRVPALRAEA DALPRVRLAH
101: VDLQWAHVLA EGWASPLRGF MREHEYLQSL HFNCVRLPDG GLVNMSLPIV LAIGDADKDQ IGGNPDVALQ GPDGGVVAIL RRVEIYPHNK EERIARTFGT
201: TAPGLPYVDE AIASAGNWLI GGDLEVLEPI KYNDGLDHYR LSPRQLRNEF DKRGADAVFA FQLRNPVHNG HALLMNDTRR RLLEMGYKNP ILLLHPLGGF
301: TKADDVPLPV RMEQHSKVLE DGVLDPETTI VSIFPSPMHY AGPTEVQWHA KARINAGANF YIVGRDPAGM GHPTEKRDLY NPDHGKKVLS MAPGLEKLNI
401: LPFKVAAYDT VAKEMAFFDP SRSQDFLFIS GTKMRTFAKN GENPPDGFMC PGGWKVLVDY YNSLQAEEAT PVPV

Best Arabidopsis Sequence Match ( AT1G19920.1 )
(BLAST)

001: MSLMIRSSYV SHITLFQPRN SKPSSFTNQI SFLSSSNNNP FLNLVYKRNL TMQSVSKMTV KSSLIDPDGG ELVELIVPET EIGVKKAESE TMPKVKLNQI
101: DLEWVHVISE GWASPLKGFM REDEYLQSLH FNSLRLKNGT FVNMSLPIVL AIDDDTKEQI GSSENVALVC PQGDIIGSLR SVEIYKHNKE ERIARTWGTT
201: SPGLPYVEEY ITPSGNWLIG GDLEVFEPIK YNDGLDHYRL SPKQLREEFD NRQADAVFAF QLRNPVHNGH ALLMNDTRKR LLEMGYKNPV LLLHPLGGFT
301: KADDVPLDVR MEQHSKVLED GVLDPKTTIV SIFPSPMHYA GPTEVQWHAK ARINAGANFY IVGRDPAGMG HPTEKRDLYD PDHGKRVLSM APGLEKLNIL
401: PFRVAAYDTI EKKMAFFDPS RAKEFLFISG TKMRTYARTG ENPPDGFMCP SGWNVLVKYY ESLQESEAKQ QAVVSA

Arabidopsis Description

APS2ATP sulfurylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43870]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.