CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033981_P001	Maize	plastid	92.21	92.4
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	84.22	87.26
TraesCS5A01G382900.1	Wheat	plastid	83.81	87.21
TraesCS5D01G392300.1	Wheat	mitochondrion	83.81	86.84
Os03t0743900-01	Rice	plastid	84.43	86.37
GSMUA_Achr3P13570_001	Banana	cytosol	62.3	84.92
CDY29754	Canola	cytosol	46.72	80.85
HORVU5Hr1G094300.2	Barley	cytosol	73.16	77.61
Solyc03g005250.2.1	Tomato	cytosol, plastid	65.78	75.71
GSMUA_Achr1P14080_001	Banana	plastid	73.98	75.68
GSMUA_Achr8P26890_001	Banana	plastid	73.36	75.05
CDY69279	Canola	plastid	69.47	73.38
CDY10679	Canola	plastid	68.85	73.2
Bra033901.1-P	Field mustard	plastid	68.65	72.98
KRG91385	Soybean	plastid	69.67	72.96
CDX92964	Canola	plastid	69.06	72.94
AT3G22890.1	Thale cress	plastid	69.06	72.79
Bra001891.1-P	Field mustard	plastid	68.85	72.73
KRH35429	Soybean	plastid	69.06	72.47
Bra033696.1-P	Field mustard	plastid	69.06	72.16
CDY22334	Canola	plastid	68.85	71.95
VIT_05s0020g04210.t01	Wine grape	plastid	68.65	71.73
CDY16260	Canola	plastid	68.03	71.4
AT5G43780.1	Thale cress	plastid	68.44	71.22
Bra036882.1-P	Field mustard	plastid	67.83	71.18
Solyc03g005260.2.1	Tomato	plastid	67.83	70.88
PGSC0003DMT400048741	Potato	plastid	67.01	70.47
PGSC0003DMT400034962	Potato	cytosol, plastid	67.42	70.45
Solyc09g082860.2.1	Tomato	plastid	66.6	70.04
OQU81103	Sorghum	plastid	65.37	67.3
AT4G14680.2	Thale cress	plastid	63.52	60.78
CDX94723	Canola	plastid	68.65	41.21

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	EntrezGene:8060484	InterPro:ATP-Sase_PUA-like_dom	UniProt:C5X183	EnsemblPlants:EER90894	ProteinID:EER90894
ProteinID:EER90894.1	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004020	GO:GO:0004781
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR014729	PFAM:PF01747	PFAM:PF14306	PANTHER:PTHR11055	PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf
MetaCyc:PWY-5278	MetaCyc:PWY-5340	MetaCyc:PWY-6683	MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold	EnsemblPlantsGene:SORBI_3001G094300
SUPFAM:SSF52374	SUPFAM:SSF88697	unigene:Sbi.730	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339
UniParc:UPI0001A82398	RefSeq:XP_002463896.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:7244345..7248408

Molecular Weight (calculated)

53836.8 Da

IEP (calculated)

9.608

GRAVY (calculated)

-0.319

Length

488 amino acids

Sequence
(BLAST)

001: MATQAAFLAG LSQLAAQPGR DRAVAPARVA VAAVGVGSAK VGVRVGVKAG TAEAKAVAQR RGVRCRASLI EPDGGRLVDL VAPEEGGRRA ALRREAAELP
101: HRLRLSRVDK EWVHVLSEGW ASPLQGFMRE HEFLQALHFN AIRGADGRMV NMSVPIVLSL GDAQRRAIQA DGATRVALVD QRDRPIAVLS DIEIYKHNKE
201: ERIARTWGTT APGLPYVEEA ITNAGDWLIG GDLEVIEPIK YNDGLDQYRL SPAQLREEFA RRNADAVFAF QLRNPVHNGH ALLMTDTRKR LLEMGYKNPV
301: LLLHPLGGFT KADDVPLSWR MKQHEKVLEE GVLNPESTVV AIFPSPMHYA GPTEVQWHAK ARINAGANFY IVGRDPAGMS HPTEKRDLYD ADHGKKVLSM
401: APGLERLNIL PFKVAAYDTK QKKMDFFDPS RKDDFLFISG TKMRTLAKNR ENPPDGFMCP GGWKVLVEYY DSLVPSEGSS KLREPVAA

Best Arabidopsis Sequence Match ( AT4G14680.1 )
(BLAST)

001: MASMSTVFPK PTSFISQPLT KSHKSDSVTT SISFPSNSKT RSLRTISVRA GLIEPDGGKL VDLVVPEPRR REKKHEAADL PRVRLTAIDL QWMHVLSEGW
101: ASPLRGFMRE SEFLQTLHFN LLNLDDGSVV NMSVPIVLAI DDQQKALIGE SKRVSLVDSD DNPIAILNDI EIYKHPKEER IARTWGTTAP GLPYVEEAIT
201: NAGDWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK
301: QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
401: KMAFFDPSRA QDFLFISGTK MRALAKNREN PPDGFMCPGG WKVLVDYYDS LTLTGNTKLP EKIPV

Arabidopsis Description

APS3Pseudouridine synthase/archaeosine transglycosylase-like family protein [Source:TAIR;Acc:AT4G14680]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.