Factsheet for AT4G14680.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29754	Canola	cytosol	46.27	83.69
Bra036882.1-P	Field mustard	plastid	75.49	82.8
CDY16260	Canola	plastid	75.49	82.8
AT3G22890.1	Thale cress	plastid	71.37	78.62
Zm00001d048381_P001	Maize	cytosol, mitochondrion, plastid	17.45	76.72
Zm00001d033100_P001	Maize	cytosol, mitochondrion, plastid	17.45	76.72
GSMUA_Achr3P13570_001	Banana	cytosol	53.53	76.26
Zm00001d025503_P001	Maize	cytosol	20.98	75.89
Solyc03g005250.2.1	Tomato	cytosol, plastid	61.37	73.82
AT5G43780.1	Thale cress	plastid	66.67	72.49
Solyc09g082860.2.1	Tomato	plastid	63.92	70.26
PGSC0003DMT400048741	Potato	plastid	63.73	70.04
Solyc03g005260.2.1	Tomato	plastid	64.12	70.02
PGSC0003DMT400034962	Potato	cytosol, plastid	63.73	69.59
GSMUA_Achr1P14080_001	Banana	plastid	63.33	67.71
TraesCS5A01G382900.1	Wheat	plastid	60.78	66.1
GSMUA_Achr8P26890_001	Banana	plastid	61.37	65.62
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	60.59	65.61
TraesCS5D01G392300.1	Wheat	mitochondrion	60.59	65.61
Os03t0743900-01	Rice	plastid	60.98	65.2
Zm00001d033981_P001	Maize	plastid	60.78	63.66
EER90894	Sorghum	plastid	60.78	63.52
Zm00001d013296_P001	Maize	plastid	60.0	62.58
HORVU5Hr1G094300.2	Barley	cytosol	56.27	62.39
AT1G19920.1	Thale cress	plastid	57.25	61.34
Zm00001d014263_P001	Maize	cytosol	25.49	31.18

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	EntrezGene:827118	UniProt:A0A1P8B8I9	ProteinID:ANM67880.1	Symbol:APS3	ArrayExpress:AT4G14680
EnsemblPlantsGene:AT4G14680	RefSeq:AT4G14680	TAIR:AT4G14680	RefSeq:AT4G14680-TAIR-G	EnsemblPlants:AT4G14680.2	InterPro:ATP-Sase_PUA-like_dom
ncoils:Coil	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004781	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPR014729	RefSeq:NP_001329676.1	PFAM:PF01747
PFAM:PF14306	PANTHER:PTHR11055	PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52374
SUPFAM:SSF88697	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	UniParc:UPI00084908EF	:

Description

APS3Pseudouridine synthase/archaeosine transglycosylase-like family protein [Source:TAIR;Acc:AT4G14680]

Coordinates

chr4:-:8413288..8415605

Molecular Weight (calculated)

57529.4 Da

IEP (calculated)

8.808

GRAVY (calculated)

-0.321

Length

510 amino acids

Sequence
(BLAST)

001: MASMSTVFPK PTSFISQPLT KSHKSDSVTT SISFPSNSKT RSLRTISVRA GLIEPDGGKL VDLVVPEPRR REKKHEAADL PRVRLTAIDL QWMHVLSEGW
101: ASPLRGFMRE SEFLQTLHFN LLNLDDGSVV NMSVPIVLAI DDQQKALIGE SKRVSLVDSD DNPIAILNDI EIYKHPKEER IARTWGTTAP GLPYVEEAIT
201: NAGDWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK
301: QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
401: KMAFFDPSRA QDFLFISGTK VNKHFSNQLG HNVTKLKCIQ FLIKDLMVVL IDESIGKEQR EPTRWIYVPW RLESPCGLLR QFDTNRKHQT SGKDSGLRPI
501: KPFICFCFST

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.