Factsheet for Solyc03g005260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117
plastid: 28183294
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 28183294 doi

R Tamburino, M Vitale, A Ruggiero, M Sassi, L Sannino, S Arena, A Costa, G Batelli, N Zambrano, A Scaloni, S Grillo, N Scotti

Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034962	Potato	cytosol, plastid	94.65	94.65
Solyc03g005250.2.1	Tomato	cytosol, plastid	81.8	90.09
Zm00001d048381_P001	Maize	cytosol, mitochondrion, plastid	22.06	88.79
Zm00001d033100_P001	Maize	cytosol, mitochondrion, plastid	22.06	88.79
Zm00001d025503_P001	Maize	cytosol	26.12	86.52
CDY29754	Canola	cytosol	51.82	85.82
GSMUA_Achr3P13570_001	Banana	cytosol	64.67	84.36
Solyc09g082860.2.1	Tomato	plastid	81.58	82.11
VIT_05s0020g04210.t01	Wine grape	plastid	79.02	79.02
AT3G22890.1	Thale cress	plastid	77.3	77.97
Bra033901.1-P	Field mustard	plastid	76.45	77.78
CDY10679	Canola	plastid	76.45	77.78
CDY69279	Canola	plastid	76.66	77.49
CDX92964	Canola	plastid	76.66	77.49
Bra001891.1-P	Field mustard	plastid	76.23	77.06
KRG91385	Soybean	plastid	76.66	76.82
CDY16260	Canola	plastid	75.8	76.13
Bra036882.1-P	Field mustard	plastid	75.59	75.91
KRH35429	Soybean	plastid	75.59	75.91
AT5G43780.1	Thale cress	plastid	73.88	73.56
CDY22334	Canola	plastid	73.45	73.45
Bra033696.1-P	Field mustard	plastid	73.45	73.45
GSMUA_Achr1P14080_001	Banana	plastid	73.88	72.33
GSMUA_Achr8P26890_001	Banana	plastid	73.02	71.49
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	71.31	70.7
TraesCS5D01G392300.1	Wheat	mitochondrion	71.31	70.7
TraesCS5A01G382900.1	Wheat	plastid	70.88	70.58
Os03t0743900-01	Rice	plastid	70.88	69.39
Zm00001d033981_P001	Maize	plastid	70.88	67.97
EER90894	Sorghum	plastid	70.88	67.83
HORVU5Hr1G094300.2	Barley	cytosol	66.6	67.61
Zm00001d013296_P001	Maize	plastid	70.66	67.48
AT4G14680.2	Thale cress	plastid	70.02	64.12
CDX94723	Canola	plastid	73.02	41.94
Zm00001d014263_P001	Maize	cytosol	28.91	32.37

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	InterPro:ATP-Sase_PUA-like_dom	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004020
GO:GO:0004781	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR014729	UniProt:K4BDV0	PFAM:PF01747	PFAM:PF14306	PANTHER:PTHR11055
PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52374	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc03g005260.2
EnsemblPlants:Solyc03g005260.2.1	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	UniParc:UPI0002769071	:

Description

No Description!

Coordinates

chr3:-:148411..153101

Molecular Weight (calculated)

52240.8 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.346

Length

467 amino acids

Sequence
(BLAST)

001: MAAISSLSLK TPTKIQSLTK THYSIPLNLP FSCRSKSKRT GSIGSRTRIR CGLLIEPDGG KLVELFVEES QRELKREDAL KLPKIKLTKI DLEWVHVLSE
101: GWASPLKGFM REDEFLQTLH FNSIRLEDGS VVNMSVPIVL AIDDSQKNLI GGSTSVALVD DENNPTAILS DIEIYKHNKE ERIARTWGTT APGLPYVDEA
201: ITHSGDWLIG GDLKVIDPVK YNDGLDRFRL SPAELRDEFT RRNADAVFAF QLRNPVHNGH ALLMTDTRRR LLEMGYKNPV LLLHPLGGYT KADDVPLHWR
301: MKQHEKVLED GVLDPETTVV SIFPSPMHYA GPTEVQWHAK ARINAGANFY IVGRDPAGMS HPLEKRDLYD ADHGKKVLSM APGLERLNIL PFRVAAYDKT
401: KNAMAFFDPS RPQDFIFISG TKMRTLAKNK ESPPDGFMCP GGWKVLVEYY DSLAAAENGR VAEPVAS

Best Arabidopsis Sequence Match ( AT3G22890.1 )
(BLAST)

001: MASMAAVLSK TPFLSQPLTK SSPNSDLPFA AVSFPSKSLR RRVGSIRAGL IAPDGGKLVE LIVEEPKRRE KKHEAADLPR VELTAIDLQW MHVLSEGWAS
101: PLGGFMRESE FLQTLHFNSL RLDDGSVVNM SVPIVLAIDD EQKARIGEST RVALFNSDGN PVAILSDIEI YKHPKEERIA RTWGTTAPGL PYVDEAITNA
201: GNWLIGGDLE VLEPVKYNDG LDRFRLSPAE LRKELEKRNA DAVFAFQLRN PVHNGHALLM TDTRRRLLEM GYKNPILLLH PLGGFTKADD VPLDWRMKQH
301: EKVLEDGVLD PETTVVSIFP SPMHYAGPTE VQWHAKARIN AGANFYIVGR DPAGMGHPVE KRDLYDADHG KKVLSMAPGL ERLNILPFRV AAYDKTQGKM
401: AFFDPSRPQD FLFISGTKMR TLAKNNENPP DGFMCPGGWK VLVDYYESLT PAGNGRLPEV VPV

Arabidopsis Description

APS1ATP sulfurylase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.