Factsheet for Solyc03g005250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048381_P001	Maize	cytosol, mitochondrion, plastid	24.29	88.79
Zm00001d033100_P001	Maize	cytosol, mitochondrion, plastid	24.29	88.79
Zm00001d025503_P001	Maize	cytosol	28.54	85.82
CDY29754	Canola	cytosol	55.66	83.69
GSMUA_Achr3P13570_001	Banana	cytosol	69.81	82.68
Solyc03g005260.2.1	Tomato	plastid	90.09	81.8
Solyc09g082860.2.1	Tomato	plastid	86.79	79.31
VIT_05s0020g04210.t01	Wine grape	plastid	83.73	76.02
KRG91385	Soybean	plastid	81.84	74.46
CDX92964	Canola	plastid	81.13	74.46
Bra001891.1-P	Field mustard	plastid	81.13	74.46
CDY69279	Canola	plastid	81.13	74.46
CDY10679	Canola	plastid	80.42	74.29
KRH35429	Soybean	plastid	81.37	74.19
Bra033901.1-P	Field mustard	plastid	79.95	73.86
AT3G22890.1	Thale cress	plastid	80.42	73.65
CDY16260	Canola	plastid	80.42	73.33
Bra036882.1-P	Field mustard	plastid	79.95	72.9
AT5G43780.1	Thale cress	plastid	79.25	71.64
Bra033696.1-P	Field mustard	plastid	78.54	71.31
CDY22334	Canola	plastid	78.54	71.31
GSMUA_Achr1P14080_001	Banana	plastid	78.54	69.81
GSMUA_Achr8P26890_001	Banana	plastid	78.3	69.6
TraesCS5A01G382900.1	Wheat	plastid	75.71	68.44
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	75.71	68.15
TraesCS5D01G392300.1	Wheat	mitochondrion	75.71	68.15
Os03t0743900-01	Rice	plastid	75.47	67.09
Zm00001d033981_P001	Maize	plastid	75.94	66.12
HORVU5Hr1G094300.2	Barley	cytosol	71.46	65.87
EER90894	Sorghum	plastid	75.71	65.78
Zm00001d013296_P001	Maize	plastid	75.71	65.64
AT4G14680.2	Thale cress	plastid	73.82	61.37
CDX94723	Canola	plastid	78.3	40.84
Zm00001d014263_P001	Maize	cytosol	31.37	31.89

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	InterPro:ATP-Sase_PUA-like_dom	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004020
GO:GO:0004781	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	InterPro:IPR014729	UniProt:K4BDU9	PFAM:PF01747	PFAM:PF14306	PANTHER:PTHR11055
PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52374	SUPFAM:SSF88697	EnsemblPlantsGene:Solyc03g005250.2
EnsemblPlants:Solyc03g005250.2.1	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	UniParc:UPI0002769070	:

Description

No Description!

Coordinates

chr3:-:144103..148150

Molecular Weight (calculated)

47429.7 Da

IEP (calculated)

5.866

GRAVY (calculated)

-0.364

Length

424 amino acids

Sequence
(BLAST)

001: MSQTRSHSGL LIEPDGGKLV ELSVDESQRD LKRKEALNLP KIKLTKIDVE WVHVLSEGWA SPLKGFMRES EFLQTLHFNS IRLEDGSVVN MSVPIVLAID
101: DSQKNQVDGS SSVALVVDEN NPIAILTDIE IYKHNKEERI ARTWGTTAPG LPYVDEAITH SGNWLIGGDL EVIEPVKYHD GLDSFRLSPS ELRDEFTRRN
201: ADAVFAFQLR NPVHNGHALL MTDTRRLLLE MGYKNPILLL HPLGGYTKED DVPLHWRMKQ HEKVLEAGVL DPETTVLSIF PSPMHYAGPT EVQWHAKARI
301: NAGANFYIVG RDPAGMSHPL EKRDLYDADH GKKVLSMAPG LERLNILPFK VAAYDKTKNG MAFFDPSRPQ DFIFISGTKM RTLAKTKESP PDGFMCPGGW
401: KVLVEYYDSL DQAENGGVSE PVPA

Best Arabidopsis Sequence Match ( AT3G22890.1 )
(BLAST)

001: MASMAAVLSK TPFLSQPLTK SSPNSDLPFA AVSFPSKSLR RRVGSIRAGL IAPDGGKLVE LIVEEPKRRE KKHEAADLPR VELTAIDLQW MHVLSEGWAS
101: PLGGFMRESE FLQTLHFNSL RLDDGSVVNM SVPIVLAIDD EQKARIGEST RVALFNSDGN PVAILSDIEI YKHPKEERIA RTWGTTAPGL PYVDEAITNA
201: GNWLIGGDLE VLEPVKYNDG LDRFRLSPAE LRKELEKRNA DAVFAFQLRN PVHNGHALLM TDTRRRLLEM GYKNPILLLH PLGGFTKADD VPLDWRMKQH
301: EKVLEDGVLD PETTVVSIFP SPMHYAGPTE VQWHAKARIN AGANFYIVGR DPAGMGHPVE KRDLYDADHG KKVLSMAPGL ERLNILPFRV AAYDKTQGKM
401: AFFDPSRPQD FLFISGTKMR TLAKNNENPP DGFMCPGGWK VLVDYYESLT PAGNGRLPEV VPV

Arabidopsis Description

APS1ATP sulfurylase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.