CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29754	Canola	cytosol	60.43	99.65
Bra036882.1-P	Field mustard	plastid	98.28	98.28
Zm00001d048381_P001	Maize	cytosol, mitochondrion, plastid	22.15	88.79
Zm00001d033100_P001	Maize	cytosol, mitochondrion, plastid	22.15	88.79
Zm00001d025503_P001	Maize	cytosol	26.24	86.52
CDY69279	Canola	plastid	84.73	85.28
CDX92964	Canola	plastid	84.52	85.06
CDY10679	Canola	plastid	83.66	84.75
GSMUA_Achr3P13570_001	Banana	cytosol	64.52	83.8
Solyc03g005250.2.1	Tomato	cytosol, plastid	73.33	80.42
Solyc09g082860.2.1	Tomato	plastid	78.06	78.23
CDY22334	Canola	plastid	78.28	77.94
PGSC0003DMT400048741	Potato	plastid	77.63	77.8
PGSC0003DMT400034962	Potato	cytosol, plastid	76.56	76.23
Solyc03g005260.2.1	Tomato	plastid	76.13	75.8
AT4G14680.2	Thale cress	plastid	82.8	75.49
GSMUA_Achr1P14080_001	Banana	plastid	74.41	72.54
GSMUA_Achr8P26890_001	Banana	plastid	72.69	70.86
TraesCS5A01G382900.1	Wheat	plastid	71.4	70.79
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	71.4	70.49
TraesCS5D01G392300.1	Wheat	mitochondrion	71.4	70.49
Os03t0743900-01	Rice	plastid	71.83	70.02
EER90894	Sorghum	plastid	71.4	68.03
Zm00001d033981_P001	Maize	plastid	70.97	67.76
Zm00001d013296_P001	Maize	plastid	70.75	67.28
HORVU5Hr1G094300.2	Barley	cytosol	66.45	67.17
CDY29382	Canola	plastid	68.6	66.05
CDX83735	Canola	plastid	68.39	65.84
CDY70746	Canola	plastid	67.53	65.01
CDX96913	Canola	plastid	16.56	57.46
CDX94723	Canola	plastid	76.99	44.03
Zm00001d014263_P001	Maize	cytosol	28.6	31.89

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	GO:A0A078FP79	UniProt:A0A078FP79	InterPro:ATP-Sase_PUA-like_dom	EnsemblPlants:CDY16260	ProteinID:CDY16260
ProteinID:CDY16260.1	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004781	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00090739001	InterPro:IPR014729	PFAM:PF01747
PFAM:PF14306	PANTHER:PTHR11055	PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	MetaCyc:PWY-5278	MetaCyc:PWY-5340
MetaCyc:PWY-6683	MetaCyc:PWY-6932	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52374	SUPFAM:SSF88697	InterPro:Sulfurylase_cat_dom
InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	UniPathway:UPA00140	UniParc:UPI0004EC98F5	SEG:seg	:

Description

BnaC01g22950DBnaC01g22950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FP79]

Coordinates

chrLK032062:+:149711..151896

Molecular Weight (calculated)

51859.6 Da

IEP (calculated)

8.415

GRAVY (calculated)

-0.288

Length

465 amino acids

Sequence
(BLAST)

001: MASMSTAFPK TTPFLSHPLT KSDSLIATTV SFPSSARSRS LRRATLRVRS ALIEPDGGKL VELVVPETRR REKKHEAADL PRVKLTAIDL QWMHVLSEGW
101: ASPLRGFMRE AEFLQTLHFN SLRLDDGSVV NMSVPIVLAI DDEQKALIGE SKRVALVDSD DNPIAILSDI EIYKHPKEER IARTWGTTAP GLPFAEEAIT
201: NAGNWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK
301: QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
401: KMAFFDPSRA QDFLFISGTK MRGLAKNKES PPDGFMCPGG WKVLVDYYDS LSLSGNARLP EKVPV

Best Arabidopsis Sequence Match ( AT4G14680.1 )
(BLAST)

001: MASMSTVFPK PTSFISQPLT KSHKSDSVTT SISFPSNSKT RSLRTISVRA GLIEPDGGKL VDLVVPEPRR REKKHEAADL PRVRLTAIDL QWMHVLSEGW
101: ASPLRGFMRE SEFLQTLHFN LLNLDDGSVV NMSVPIVLAI DDQQKALIGE SKRVSLVDSD DNPIAILNDI EIYKHPKEER IARTWGTTAP GLPYVEEAIT
201: NAGDWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK
301: QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
401: KMAFFDPSRA QDFLFISGTK MRALAKNREN PPDGFMCPGG WKVLVDYYDS LTLTGNTKLP EKIPV

Arabidopsis Description

APS3Pseudouridine synthase/archaeosine transglycosylase-like family protein [Source:TAIR;Acc:AT4G14680]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.