Factsheet for TraesCS5A01G382900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plastid: 16595579
plastid: 18419817

msms PMID: 18419817 doi

FM Dupont

Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G387300.1	Wheat	mitochondrion, plastid	95.95	95.54
TraesCS5D01G392300.1	Wheat	mitochondrion	95.74	95.33
Zm00001d048381_P001	Maize	cytosol, mitochondrion, plastid	23.24	93.97
Zm00001d033100_P001	Maize	cytosol, mitochondrion, plastid	23.24	93.97
Zm00001d025503_P001	Maize	cytosol	28.14	93.62
Os03t0743900-01	Rice	plastid	86.35	84.91
GSMUA_Achr3P13570_001	Banana	cytosol	64.61	84.64
EER90894	Sorghum	plastid	87.21	83.81
Zm00001d033981_P001	Maize	plastid	86.35	83.16
HORVU5Hr1G094300.2	Barley	cytosol	81.45	83.04
Zm00001d013296_P001	Maize	plastid	85.07	81.6
CDY29754	Canola	cytosol	48.4	80.5
Solyc03g005250.2.1	Tomato	cytosol, plastid	68.44	75.71
GSMUA_Achr1P14080_001	Banana	plastid	76.76	75.47
TraesCS2A01G032500.1	Wheat	cytosol, peroxisome, plastid	67.38	75.24
CDY10679	Canola	plastid	71.22	72.77
CDY69279	Canola	plastid	71.64	72.73
AT3G22890.1	Thale cress	plastid	71.64	72.57
Bra033901.1-P	Field mustard	plastid	71.0	72.55
GSMUA_Achr8P26890_001	Banana	plastid	73.77	72.54
CDX92964	Canola	plastid	71.43	72.51
Bra001891.1-P	Field mustard	plastid	71.22	72.29
KRG91385	Soybean	plastid	71.43	71.89
AT5G43780.1	Thale cress	plastid	71.64	71.64
CDY16260	Canola	plastid	70.79	71.4
Bra036882.1-P	Field mustard	plastid	70.79	71.4
KRH35429	Soybean	plastid	70.79	71.4
VIT_05s0020g04210.t01	Wine grape	plastid	71.0	71.31
Bra033696.1-P	Field mustard	plastid	70.79	71.09
PGSC0003DMT400048741	Potato	plastid	70.15	70.91
CDY22334	Canola	plastid	70.58	70.88
Solyc03g005260.2.1	Tomato	plastid	70.58	70.88
Solyc09g082860.2.1	Tomato	plastid	69.94	70.69
PGSC0003DMT400034962	Potato	cytosol, plastid	69.72	70.02
AT4G14680.2	Thale cress	plastid	66.1	60.78
CDX94723	Canola	plastid	70.58	40.71

Protein Annotations

KEGG:00230+2.7.7.4	KEGG:00261+2.7.7.4	KEGG:00450+2.7.7.4	KEGG:00920+2.7.7.4	MapMan:25.2.1.1	Gene3D:3.10.400.10
Gene3D:3.40.50.620	InterPro:ATP-Sase_PUA-like_dom	GO:GO:0000103	GO:GO:0003674	GO:GO:0003824	GO:GO:0004781
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:IPR014729	PFAM:PF01747
PFAM:PF14306	PANTHER:PTHR11055	PANTHER:PTHR11055:SF18	InterPro:PUA-like_sf	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52374
SUPFAM:SSF88697	InterPro:Sulfurylase_cat_dom	InterPro:Sulphate_adenylyltransferase	TIGRFAMs:TIGR00339	EnsemblPlantsGene:TraesCS5A01G382900	EnsemblPlants:TraesCS5A01G382900.1
TIGR:cd00517	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:580803022..580805966

Molecular Weight (calculated)

51717.0 Da

IEP (calculated)

9.364

GRAVY (calculated)

-0.337

Length

469 amino acids

Sequence
(BLAST)

001: MATQAAFAVR FPQLARPSRG HGQGQPARVG VAVRGGRAAA RGVRCRAGGL IEPDGGRLVE LVAPEEGGRR AALRREAAAL PHRVRLGRVD TEWLHVLSEG
101: WASPLRGFMR ETEFLQALHF NAVRGADGTL VNMSVPIVLA LDDAQRRAIQ ADGATAVALV DAHDRPVAVL SDIEIYKHNK EERIARTWGT TARGLPYVEE
201: AITNAGDWLI GGDLEVIEPI KYNDGLDQYR LSPSQLREEF ARRNADAVFA FQLRNPVHNG HALLMTDTRR RLLEMGYKNP VLLLHPLGGF TKADDVPLSV
301: RMKQHEKVLE EGVLNPESTV VAIFPSPMHY AGPTEVQWHA KARINAGANF YIVGRDPAGM GHPTEKRDLY DADHGKKVLS MAPGLERLNI LPFKVAAYDT
401: KHNKMNFFDP SRKEDFLFIS GTKMRSLAKN RESPPDGFMC PGGWKVLVEY YDSLAPPEGS SKLREAVAA

Best Arabidopsis Sequence Match ( AT5G43780.1 )
(BLAST)

001: MASSAAAIVS GSPFRSSPLI HNHHASRYAP GSISVVSLPR QVSRRGLSVK SGLIEPDGGK LMNLVVEESR RRVMKHEAET VPARIKLNRV DLEWVHVLSE
101: GWASPLKGFM RQSEFLQTLH FNSFRLEDGS VVNMSVPIVL AIDDDQKFRI GDSNQVTLVD SVGNPIAILN DIEIYKHPKE ERIARTWGTT ARGLPYAEEA
201: ITKAGNWLIG GDLQVLEPIK YNDGLDRFRL SPSQLREEFI RRGADAVFAF QLRNPVHNGH ALLMTDTRRR LLEMGYKNPV LLLNPLGGFT KADDVPLSWR
301: MRQHEKVLED GVLDPETTVV SIFPSPMLYA GPTEVQWHAK ARINAGANFY IVGRDPAGMG HPTEKRDLYD ADHGKKVLSM APGLERLNIL PFKVAAYDKT
401: QGKMAFFDPS RSQDFLFISG TKMRGLAKKK ENPPDGFMCP SGWKVLVDYY DSLSAETGNG RVSEAVASA

Arabidopsis Description

APS4ATP sulfurylase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7D8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.