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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 7
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92600
KRG93305
KRH07953
KRH10294
KRH14106
KRH16959
KRH23029
KRH24840
KRH27601
KRH29844
KRH34180
KRH38067
KRH39044
KRH41413
KRH53667
KRH56614
KRH61471
KRH64261
KRH66789
KRH69706
KRH72058
KRH74010
KRH77881

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G67090.1 KRH10294 AT3G46090.1 17259181
AT1G67090.1 KRH23029 AT3G46090.1 17259181
AT1G67090.1 KRH24840 AT3G46090.1 17259181
AT1G67090.1 KRH29844 AT3G46090.1 17259181
AT1G67090.1 KRH14106 AT5G35750.1 18642946
AT1G67090.1 KRH74010 AT5G35750.1 18642946
AT5G38420.1 KRH66789 AT2G41370.1 21798944
AT5G38420.1 KRH72058 AT2G41370.1 21798944
AT5G38420.1 KRG92600 AT3G04240.1 21798944
AT5G38420.1 KRH34180 AT3G04240.1 21798944
AT5G38420.1 KRH38067 AT3G04240.1 21798944
AT5G38420.1 KRH39044 AT3G17860.1 21798944
AT5G38420.1 KRG93305 AT3G27960.1 21798944
AT5G38420.1 KRH56614 AT3G27960.1 21798944
AT5G38420.1 KRH27601 AT4G04890.1 21798944
AT5G38420.1 KRH77881 AT4G04890.1 21798944
AT5G38420.1 KRH61471 AT4G08150.1 21798944
AT5G38420.1 KRH07953 AT5G11980.1 21798944
AT5G38420.1 KRH69706 AT5G11980.1 21798944
AT5G38420.1 KRH16959 AT5G24660.1 21798944
AT5G38420.1 KRH53667 AT5G24660.1 21798944
AT5G38420.1 KRH64261 AT5G24660.1 21798944
AT5G38430.1 KRH41413 AT2G39930.1 21798944
AT5G38430.1 KRH10294 AT3G46090.1 17259181
AT5G38430.1 KRH23029 AT3G46090.1 17259181
AT5G38430.1 KRH24840 AT3G46090.1 17259181
AT5G38430.1 KRH29844 AT3G46090.1 17259181
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH46925 Soybean plastid 80.0 88.89
KRG99965 Soybean plastid 98.0 74.81
GSMUA_Achr8P18400_001 Banana cytosol 15.0 57.69
KRH15458 Soybean plastid 77.0 48.43
Os12t0291200-00 Rice plastid 38.0 39.58
KRH18247 Soybean nucleus, plastid 68.0 38.2
KRG93873 Soybean plastid 40.0 38.1
KRG93871 Soybean plastid 67.0 37.64
KRG93867 Soybean plastid 67.0 37.64
KRG93872 Soybean plastid 50.0 37.04
PGSC0003DMT400032975 Potato mitochondrion, plastid 61.0 33.89
Solyc02g085950.2.1 Tomato extracellular 59.0 32.78
AT5G38430.1 Thale cress plastid 59.0 32.6
PGSC0003DMT400050381 Potato cytosol, extracellular, plastid 59.0 32.6
AT5G38410.3 Thale cress plastid 60.0 32.26
AT5G38420.1 Thale cress plastid 58.0 32.04
Bra025431.1-P Field mustard plastid 58.0 32.04
Bra028174.1-P Field mustard plastid 58.0 32.04
PGSC0003DMT400062138 Potato cytosol, plastid 58.0 32.04
CDY52468 Canola plastid 58.0 32.04
CDY71122 Canola plastid 58.0 32.04
Solyc03g034220.2.1 Tomato plastid 57.0 31.67
VIT_17s0000g03690.t01 Wine grape plastid 57.0 31.67
CDY01671 Canola plastid 57.0 31.49
CDX67402 Canola plastid 57.0 31.49
CDX74532 Canola plastid 57.0 31.49
CDY67657 Canola plastid 57.0 31.49
CDY01665 Canola plastid 56.0 30.94
CDX74525 Canola plastid 56.0 30.94
Solyc02g063150.2.1 Tomato nucleus, plastid 56.0 30.94
Bra028406.1-P Field mustard plastid 56.0 30.94
CDX99682 Canola plastid 58.0 30.69
AT1G67090.1 Thale cress plastid 54.0 30.0
PGSC0003DMT400067905 Potato plastid 47.0 29.56
Bra028181.1-P Field mustard plastid 47.0 29.01
CDY42337 Canola plastid 50.0 27.62
GSMUA_Achr2P22730_001 Banana unclear 43.0 27.22
GSMUA_Achr6P09710_001 Banana plastid 43.0 27.22
CDY42338 Canola plastid 49.0 27.07
GSMUA_Achr10P... Banana plasma membrane 42.0 26.58
Bra034024.1-P Field mustard plastid 48.0 26.52
Bra034027.1-P Field mustard plastid 48.0 26.52
Bra034029.1-P Field mustard plastid 48.0 26.52
CDY12613 Canola plastid 48.0 26.52
CDY12616 Canola plastid 48.0 26.52
Os12t0274700-01 Rice plastid 46.0 26.29
Os12t0291100-01 Rice plastid 46.0 26.29
EES09292 Sorghum plastid 44.0 26.04
Os12t0292400-01 Rice extracellular 45.0 25.71
TraesCS2D01G065500.1 Wheat plastid 42.0 25.45
Zm00001d004894_P001 Maize plastid 43.0 25.29
Zm00001d052595_P001 Maize plastid 43.0 25.29
Os12t0291400-01 Rice plastid 44.0 25.14
HORVU1Hr1G035720.2 Barley plastid 44.0 25.0
TraesCS2B01G079300.1 Wheat plastid 43.0 24.71
TraesCS2B01G079100.1 Wheat plastid 43.0 24.71
TraesCS2D01G065100.2 Wheat plastid 43.0 24.71
TraesCS2D01G065300.1 Wheat plastid 43.0 24.71
TraesCS2A01G066700.1 Wheat plastid 43.0 24.71
KRH01757 Soybean plastid 37.0 24.67
TraesCS5B01G162600.1 Wheat plastid 43.0 24.57
TraesCS5A01G165700.1 Wheat plastid 43.0 24.57
TraesCS5A01G165400.2 Wheat plastid 43.0 24.57
TraesCS5B01G162800.1 Wheat plastid 43.0 24.57
TraesCS2D01G065600.1 Wheat plastid 43.0 24.57
HORVU2Hr1G010630.1 Barley plastid 43.0 24.57
TraesCS2D01G065400.1 Wheat plastid 43.0 24.57
TraesCS5D01G169600.2 Wheat plastid 43.0 24.57
TraesCS2D01G065200.1 Wheat plastid 43.0 24.57
TraesCS5D01G169900.2 Wheat plastid 43.0 24.57
TraesCS2B01G079400.1 Wheat plastid 43.0 24.57
TraesCS2B01G079200.1 Wheat plastid 43.0 24.57
TraesCS2A01G067300.1 Wheat plastid 43.0 24.57
TraesCS2A01G066800.1 Wheat plastid 43.0 24.57
HORVU5Hr1G051010.2 Barley plastid 43.0 24.57
HORVU2Hr1G010690.1 Barley plastid 43.0 24.57
HORVU5Hr1G033540.2 Barley plastid 43.0 24.57
HORVU5Hr1G038630.1 Barley plastid 43.0 24.57
CDY42341 Canola plastid 45.0 24.19
TraesCS2A01G067200.1 Wheat plastid 42.0 24.0
TraesCS2A01G067100.1 Wheat plastid 42.0 24.0
TraesCS2A01G067000.1 Wheat plastid 42.0 24.0
TraesCS2B01G078900.2 Wheat plastid 43.0 23.24
HORVU7Hr1G048050.2 Barley plastid 20.0 22.73
HORVU2Hr1G010670.1 Barley plastid 43.0 22.63
HORVU5Hr1G050990.4 Barley plastid 43.0 22.4
TraesCS2A01G066900.1 Wheat plastid 43.0 22.4
TraesCS2B01G079500.1 Wheat plastid 43.0 22.28
KRH19034 Soybean plastid 37.0 21.51
CDY12612 Canola cytosol 11.0 9.09
Protein Annotations
EMBL:ACUP02011353EnsemblPlants:KRG99964EnsemblPlantsGene:GLYMA_18G182200Gene3D:3.30.190.10InterPro:IPR036385InterPro:RuBisCO_sc
InterPro:RuBisCO_ssu_NInterPro:RuBisCO_ssu_sfKEGG:00630+4.1.1.39KEGG:00710+4.1.1.39MetaCyc:PWY-5532MetaCyc:PWY-5723
PANTHER:PTHR31262PFAM:PF12338PRINTS:PR00152ProteinID:KRG99964ProteinID:KRG99964.1SUPFAM:SSF55239
UniParc:UPI0006EDBC9AUniProt:A0A0R0F1D6MapMan:1.2.1.1.2:::
Description
hypothetical protein
Coordinates
chr18:-:43916230..43916565
Molecular Weight (calculated)
11542.1 Da
IEP (calculated)
9.588
GRAVY (calculated)
-0.329
Length
100 amino acids
Sequence
(BLAST)
1: MASSMMSSPA VTTVNRGSMV APFTGLKSMA GFPVRKTNYD ITYHKQHWKI TMHQHTMQIK VWPQIGKKFE TLSYLPPLTR EQLLKEDGWI PCLEFELEVN
Best Arabidopsis Sequence Match ( AT5G38410.3 )
(BLAST)
001: MASSMLSSAA VVTSPAQATM VAPFTGLKSS AAFPVTRKTN KDITSIASNG GRVSCMKVWP PIGKKKFETL SYLPDLSDVE LAKEVDYLLR NKWIPCVEFE
101: LEVINTKHGF VYREHGNTPG YYDGRYWTMW KLPLFGCTDS AQVLKEVEEC KKEYPGAFIR IIGFDNTRQV QCISFIAYKP PSFTEA
Arabidopsis Description
Ribulose bisphosphate carboxylase small chain [Source:UniProtKB/TrEMBL;Acc:B3H5S2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.