CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0915400-00	Rice	plastid	62.5	32.05
Zm00001d003691_P002	Maize	cytosol	65.0	24.19
Zm00001d050343_P001	Maize	cytosol	63.75	23.18
VIT_14s0036g00890.t01	Wine grape	cytosol	23.75	12.67
KRG92600	Soybean	cytosol	81.25	6.58
KRH34180	Soybean	cytosol	80.0	6.48
Bra040144.1-P	Field mustard	cytosol, mitochondrion	72.5	5.95
CDY21133	Canola	cytosol, mitochondrion	72.5	5.95
CDY29989	Canola	cytosol	72.5	5.94
AT3G04240.1	Thale cress	cytosol	71.25	5.83
VIT_04s0043g00760.t01	Wine grape	cytosol	71.25	5.78
HORVU2Hr1G067320.4	Barley	cytosol	68.75	5.74
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	68.75	5.58
TraesCS2B01G293500.1	Wheat	cytosol	68.75	5.58
TraesCS2A01G275800.1	Wheat	cytosol	68.75	5.58
PGSC0003DMT400040741	Potato	cytosol	66.25	5.41
OQU84950	Sorghum	cytosol	67.5	5.34
Zm00001d016506_P003	Maize	cytosol	68.75	5.22
GSMUA_Achr3P17280_001	Banana	cytosol	65.0	5.19
GSMUA_Achr1P17080_001	Banana	cytosol	71.25	5.18
Solyc09g097830.2.1	Tomato	cytosol	61.25	4.97
Zm00001d031337_P001	Maize	cytosol	6.25	4.07
Zm00001d015678_P001	Maize	extracellular	5.0	2.63
KRH67954	Soybean	cytosol	21.25	1.85
KRG96211	Soybean	plastid	21.25	1.75
KRH72262	Soybean	cytosol	20.0	1.72
KRH32780	Soybean	cytosol	18.75	1.56
KRH33574	Soybean	cytosol	10.0	1.0
KRG90336	Soybean	nucleus	8.75	0.87
KRH38138	Soybean	cytosol	1.25	0.53
Os02t0489550-00	Rice	endoplasmic reticulum, golgi	2.5	0.31

Protein Annotations

EMBL:ACUP02005604	EnsemblPlants:KRH38067	EnsemblPlantsGene:GLYMA_09G108700	Gene3D:3.40.50.11380	InterPro:OGT/SEC/SPY_C	KEGG:00514+2.4.1.255
PANTHER:PTHR44998	PFAM:PF13844	ProteinID:KRH38067	ProteinID:KRH38067.1	TMHMM:TMhelix	UniParc:UPI000294F7A4
UniProt:K7LD47	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:21132124..21132454

Molecular Weight (calculated)

9234.1 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.100

Length

80 amino acids

Sequence
(BLAST)

1: MHNRKNVEVF CYALSVNDGT EWRQRIQSEA EHFVDVSAMS LDAIAKMINE DKIHILVNLN GYTKVGGNSF MFFLVFKLHN

Best Arabidopsis Sequence Match ( AT3G04240.2 )
(BLAST)

001: MESGDLNRAL QYYKEAVKLK PAFPDAYLNL GNVYKALGRP TEAIMCYQHA LQMRPNSAMA FGNIASIYYE QGQLDLAIRH YKQALSRDPR FLEAYNNLGN
101: ALKDIGRVDE AVRCYNQCLA LQPNHPQAMA NLGNIYMEWN MMGPASSLFK ATLAVTTGLS APFNNLAIIY KQQGNYSDAI SCYNEVLRID PLAADALVNR
201: GNTYKEIGRV TEAIQDYMHA INFRPTMAEA HANLASAYKD SGHVEAAITS YKQALLLRPD FPEATCNLLH TLQCVCCWED RSKMFAEVES IIRRQINMSV
301: LPSVQPFHAI AYPIDPILAL EISRKYAAHC SIIASRFGLP PFTHPAGLPV KREGGFKRLR IGYVSSDFGN HPLSHLMGSV FGMHNRENVE VFCYALSAND
401: NTEWRQRIQS EAEHFLDVSA MSSDAIAKII NQDKIQILIN LNGYTKGARN EIFAMQPAPI QVSYMGFPGT TGATYIDYLV TDEFVSPLQY AHIYSEKLVH
501: LPHCYFVNDY KQKNQDVLDP NSKPKRSDYG LPEDKFIFAC FNQLYKMDPE IVNTWCNILK RVPNSALWLL RFPAAGEMRF RTYAAAQGVQ PDQIIFTDVA
601: MKSEHIRRSV LADVILDTPL CNGHTTGTDV LWAGVPMITL PLEKMATRVA GSLCLATGLG HGMIVNSLEE YEEKAVSLAL NKPKLQALTK ELRASRLTCP
701: LFDTMRWVKN LERSYFKMWN LHCSGQQPQH FKVLENDLEF PHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.