CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21133	Canola	cytosol, mitochondrion	99.18	99.28
Bra040144.1-P	Field mustard	cytosol, mitochondrion	98.87	98.97
AT3G04240.1	Thale cress	cytosol	94.57	94.47
VIT_14s0036g00890.t01	Wine grape	cytosol	12.5	81.33
KRH34180	Soybean	cytosol	80.94	79.96
KRG92600	Soybean	cytosol	80.94	79.96
VIT_04s0043g00760.t01	Wine grape	cytosol	79.51	78.7
PGSC0003DMT400040741	Potato	cytosol	76.54	76.3
Solyc09g097830.2.1	Tomato	cytosol	76.64	75.94
Os01t0915400-00	Rice	plastid	12.09	75.64
HORVU2Hr1G067320.4	Barley	cytosol	73.98	75.37
GSMUA_Achr3P17280_001	Banana	cytosol	76.64	74.65
TraesCS2A01G275800.1	Wheat	cytosol	74.08	73.33
TraesCS2B01G293500.1	Wheat	cytosol	74.08	73.33
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	73.98	73.23
KRH38067	Soybean	cytosol	5.94	72.5
OQU84950	Sorghum	cytosol	74.69	72.11
Zm00001d016506_P003	Maize	cytosol	74.8	69.33
Zm00001d015678_P001	Maize	extracellular	10.66	68.42
Os02t0489550-00	Rice	endoplasmic reticulum, golgi	45.8	68.35
Zm00001d031337_P001	Maize	cytosol	8.61	68.29
GSMUA_Achr1P17080_001	Banana	cytosol	76.54	67.91
Zm00001d050343_P001	Maize	cytosol	12.3	54.55
Zm00001d003691_P002	Maize	cytosol	9.22	41.86
CDY08515	Canola	cytosol	22.95	24.67
CDY01033	Canola	cytosol	22.95	24.51
CDX73870	Canola	cytosol	20.9	22.67
CDY00739	Canola	cytosol	22.64	20.67
CDY55452	Canola	cytosol	2.87	12.61
CDY46833	Canola	cytosol, mitochondrion, nucleus, plastid	7.48	9.03

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	MapMan:18.1.2.2.2	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000	UniProt:A0A078GY04
EnsemblPlants:CDY29989	ProteinID:CDY29989	ProteinID:CDY29989.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00044511001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:OGT/SEC/SPY_C	PFAM:PF00515
PFAM:PF13176	PFAM:PF13181	PFAM:PF13414	PFAM:PF13844	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR44998	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1
InterPro:TPR_repeat	UniPathway:UPA00378	UniParc:UPI0004EF27D1	SEG:seg	:	:

Description

BnaC01g40190DBnaC01g40190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY04]

Coordinates

chrLK032247:-:314383..320353

Molecular Weight (calculated)

110174.0 Da

IEP (calculated)

7.275

GRAVY (calculated)

-0.235

Length

976 amino acids

Sequence
(BLAST)

001: MFSSKNGAGM MMVSRPVFLD EVFTRKLDLS SSSSSSSSLL LNQFNKSHEA DDDARLTLAH QLYKAGDFKQ ALEHSNLVYQ RNPLRTDNLL LIGAIYYQLQ
101: EYDMCIARNE EALRIQPQFA ECYGNMANAW KEKGDTDRAI RYYLIAIELK PNYADAWSNL ASAYMRKGRL SEATQCCQQA LSLNPLLVDA HSNLGNLMKA
201: QGLIQEAYSC YLEAVRIQPT FAIAWSNLAG LFMESGDLNR ALQYYKEAVK LKPAFPDAYF NLGNVYKALG RPTEAIMCYQ HAIQARPSFA MAFGNIATIY
301: YEQGQLDLAI RHYKQAISRD PRFLEAYNNL GNALKDIGRV EEAVRCYNHC LHLQPNHPQA MANLGNIYME WNMMGPASSL FQATLTVTTG LSAPFNNLAL
401: IYKQQGNYTN AISCYNEVLR IDPLAADALV NRGNTFKEIG RVTEAIQDYM HAITFRPTMA EAHANLASAY KDSGHVEAAI TSYKQALLLR PDFPEATCNL
501: LHTLQCVCCW EDRSKMFTEV EGIIRRQINM SVLPSVQPFH AIAYPIDPIL ALEISRKYAA HCSIIASRFG LPPFNHPAGV PVKREGGFKR LRIGYVSSDF
601: GNHPLSHLMG SVFGMHNREN VEVFCYALSP NDGTEWRQRT QSEAEHFLDV SAMSSDAIAK TINEDKIQIL INLNGYTKGA RNEIFAMQPA PIQVSYMGFP
701: GTTGATYIDY LVTDEFVSPL QYAHIYSEKL VHLPHCYFVN DYKQKNQDVL DPKSKPKRSD YGLPEDKFIF GCFNQLYKMD PEIVNTWCNV LKRVPNSALW
801: LLRFPAAGEM RFRAYAAAQG VHPDQIIFTD VAMKNEHIRR SVLADVILDT PLCNGHTTGT DVLWAGVPMI TLPLEKMATR VAGSLCLATG LGHEMIVNSL
901: EEYEEKAVSL AMNKPKLQAL TKELRASRLT CPLFDTMRWV KNLERSYFKM WNLHCSGQKP QHFKVVENDL EFPHDR

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.