Factsheet for Os02t0489550-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031337_P001	Maize	cytosol	13.61	72.36
VIT_14s0036g00890.t01	Wine grape	cytosol	12.54	54.67
OQU84950	Sorghum	cytosol	83.49	54.01
HORVU2Hr1G067320.4	Barley	cytosol	77.06	52.61
TraesCS2A01G275800.1	Wheat	cytosol	77.22	51.22
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	77.06	51.12
TraesCS2B01G293500.1	Wheat	cytosol	76.61	50.81
GSMUA_Achr3P17280_001	Banana	cytosol	74.77	48.8
VIT_04s0043g00760.t01	Wine grape	cytosol	72.02	47.77
KRG92600	Soybean	cytosol	71.87	47.57
PGSC0003DMT400040741	Potato	cytosol	71.1	47.5
KRH34180	Soybean	cytosol	71.71	47.47
Solyc09g097830.2.1	Tomato	cytosol	70.64	46.9
Bra040144.1-P	Field mustard	cytosol, mitochondrion	68.5	45.95
CDY21133	Canola	cytosol, mitochondrion	68.5	45.95
CDY29989	Canola	cytosol	68.35	45.8
AT3G04240.1	Thale cress	cytosol	67.74	45.34
Os01t0915400-00	Rice	plastid	5.81	24.36
Os08t0559300-01	Rice	cytosol	27.37	19.31
Os03t0263900-01	Rice	plasma membrane	9.94	7.67
KRH38067	Soybean	cytosol	0.31	2.5

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	MapMan:18.1.2.2.2	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000	UniProt:A0A0P0VJ70
ProteinID:BAS78732.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:OGT/SEC/SPY_C	EnsemblPlantsGene:Os02g0489550
EnsemblPlants:Os02t0489550-00	PFAM:PF13181	PFAM:PF13414	PFAM:PF13844	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR44998	SMART:SM00028	SUPFAM:SSF48452	SignalP:SignalP-noTM	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI000393BD6B	SEG:seg	:	:	:

Description

Tetratricopeptide TPR-1 domain containing protein. (Os02t0489550-00)

Coordinates

chr2:-:17046796..17054964

Molecular Weight (calculated)

72985.3 Da

IEP (calculated)

6.992

GRAVY (calculated)

-0.134

Length

654 amino acids

Sequence
(BLAST)

001: MVRATAHVSV GSLALYCLVA GWCRATVSAS ALQECPLSGP GQPWGCLACS WRGIAAIACS HGAEPQWFCV LVPRVCEINL VTRVGSVSPL GAYTWKGRLN
101: EAAQCCRQAL AINPRLVDAH SNLGNLMKAQ GFIQEAYNCY IEALRIDPQF AIAWSNLAGL FMEAGDLDKA LLYYKEAVKL KPSFADAYLN QGNVYKTMGM
201: SQEAIISYQR AVQARPDYAM AYGNLATIYY EQGQLDIAIR CYNQAIICDP QFVEAYNNMG NALKDAGRVE EAINCYRSCL ALQANHPQAL TNLGNIYMEW
301: NLISAAASFY KAAISVTSGL SSPLNNLAVI YKQQGNYADA ITCYTEVLRV DPTAADALVN RGNTFKEIGR VNEAIQDYIQ AATIRPTMAE AHANLASAYK
401: DSGHVETAIV SYKQALRLRP DFPEATCNLL HTLQGARNEI FALQPAPIQV SYMGFPGTTG AAYIDYLVTD EKNRDCLDPV CPHKRSDYGL PEDKFIFACF
501: NQLYKMDPEI FDTWCNILKR VPNSALWLLR FPAAGETRVR AHAAARGVRP DQIIFTDVAM KNEHIRRSSL ADLFLDTMKE YEDRAVDLAL NPAKLQALTN
601: KLKEVRMTCP LFDTARWVRN LERAYYKMWN LYCSGRHREP FKVIEDDNEF PYDR

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.