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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29989 Canola cytosol 94.47 94.57
CDY21133 Canola cytosol, mitochondrion 94.27 94.46
Bra040144.1-P Field mustard cytosol, mitochondrion 93.96 94.15
VIT_14s0036g00890.t01 Wine grape cytosol 12.69 82.67
KRH34180 Soybean cytosol 81.88 80.97
KRG92600 Soybean cytosol 81.68 80.77
VIT_04s0043g00760.t01 Wine grape cytosol 79.84 79.11
PGSC0003DMT400040741 Potato cytosol 76.87 76.71
Solyc09g097830.2.1 Tomato cytosol 77.07 76.45
HORVU2Hr1G067320.4 Barley cytosol 74.1 75.57
Os01t0915400-00 Rice plastid 11.87 74.36
GSMUA_Achr3P17280_001 Banana cytosol 76.25 74.35
TraesCS2B01G293500.1 Wheat cytosol 74.21 73.53
TraesCS2A01G275800.1 Wheat cytosol 74.1 73.43
TraesCS2D01G274800.1 Wheat endoplasmic reticulum 74.0 73.33
OQU84950 Sorghum cytosol 74.82 72.3
KRH38067 Soybean cytosol 5.83 71.25
Zm00001d016506_P003 Maize cytosol 74.62 69.23
Zm00001d015678_P001 Maize extracellular 10.64 68.42
GSMUA_Achr1P17080_001 Banana cytosol 76.46 67.91
Os02t0489550-00 Rice endoplasmic reticulum, golgi 45.34 67.74
Zm00001d031337_P001 Maize cytosol 8.5 67.48
Zm00001d050343_P001 Maize cytosol 12.38 55.0
Zm00001d003691_P002 Maize cytosol 9.31 42.33
AT3G11540.1 Thale cress cytosol 23.13 24.73
AT2G32450.1 Thale cress cytosol 7.47 9.1
AT1G05150.1 Thale cress cytosol 7.47 9.03
Protein Annotations
KEGG:00514+2.4.1.255Gene3D:1.25.40.10MapMan:18.1.2.2.2Gene3D:3.40.50.11380Gene3D:3.40.50.2000EntrezGene:819579
ProteinID:AAF26789.1ProteinID:AEE74056.1EMBL:AF441079EMBL:AK226884ProteinID:ANM63991.1ArrayExpress:AT3G04240
EnsemblPlantsGene:AT3G04240RefSeq:AT3G04240TAIR:AT3G04240RefSeq:AT3G04240-TAIR-GEnsemblPlants:AT3G04240.1TAIR:AT3G04240.1
EMBL:AY090938EMBL:AY117340Unigene:At.27850GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005975GO:GO:0006464GO:GO:0006486GO:GO:0006493GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0016757
GO:GO:0019538InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734EMBL:KJ138841RefSeq:NP_001326045.1
RefSeq:NP_187074.1ProteinID:OAP04458.1InterPro:OGT/SEC/SPY_CPFAM:PF00515PFAM:PF13176PFAM:PF13181
PFAM:PF13414PFAM:PF13424PFAM:PF13844PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281
PFscan:PS50005PFscan:PS50293PANTHER:PTHR44998UniProt:Q0WV85UniProt:Q9M8Y0Symbol:SEC
SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_1InterPro:TPR_repeat
UniParc:UPI000009F684SEG:seg::::
Description
SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
Coordinates
chr3:-:1113914..1120933
Molecular Weight (calculated)
110120.0 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.221
Length
977 amino acids
Sequence
(BLAST)
001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.