Factsheet for GSMUA_Achr3P17280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0036g00890.t01	Wine grape	cytosol	12.08	80.67
VIT_04s0043g00760.t01	Wine grape	cytosol	78.74	80.02
HORVU2Hr1G067320.4	Barley	cytosol	76.05	79.54
KRG92600	Soybean	cytosol	77.45	78.54
KRH34180	Soybean	cytosol	77.35	78.44
PGSC0003DMT400040741	Potato	cytosol	76.25	78.04
TraesCS2A01G275800.1	Wheat	cytosol	76.75	77.99
TraesCS2B01G293500.1	Wheat	cytosol	76.65	77.89
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	76.45	77.69
Solyc09g097830.2.1	Tomato	cytosol	75.95	77.26
OQU84950	Sorghum	cytosol	77.94	77.25
CDY29989	Canola	cytosol	74.65	76.64
CDY21133	Canola	cytosol, mitochondrion	74.55	76.62
Bra040144.1-P	Field mustard	cytosol, mitochondrion	74.35	76.41
AT3G04240.1	Thale cress	cytosol	74.35	76.25
Os02t0489550-00	Rice	endoplasmic reticulum, golgi	48.8	74.77
Zm00001d016506_P003	Maize	cytosol	77.45	73.69
GSMUA_Achr1P17080_001	Banana	cytosol	79.54	72.45
Zm00001d015678_P001	Maize	extracellular	10.38	68.42
Zm00001d031337_P001	Maize	cytosol	8.18	66.67
KRH38067	Soybean	cytosol	5.19	65.0
Zm00001d050343_P001	Maize	cytosol	12.08	55.0
Zm00001d003691_P002	Maize	cytosol	8.68	40.47
GSMUA_Achr3P22610_001	Banana	cytosol	23.15	25.27
GSMUA_Achr10P...	Banana	plasma membrane	7.78	8.67

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	MapMan:18.1.2.2.2	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr3G17280_001	EnsemblPlants:GSMUA_Achr3P17280_001	EnsemblPlants:GSMUA_Achr3T17280_001	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:M0SFE4	InterPro:OGT/SEC/SPY_C	PFAM:PF00515	PFAM:PF07719
PFAM:PF13181	PFAM:PF13414	PFAM:PF13844	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44998
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_2
InterPro:TPR_repeat	UniParc:UPI000296ECE7	SEG:seg	:	:	:

Description

Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:GMGC_GENE;Acc:GSMUA_Achr3G17280_001]

Coordinates

chr3:-:18567619..18578327

Molecular Weight (calculated)

112622.0 Da

IEP (calculated)

6.948

GRAVY (calculated)

-0.251

Length

1002 amino acids

Sequence
(BLAST)

0001: MMLSLLSDAR QHLQQHPAPP PPPPPQHPPP FGSGGGGGLG FLKGSLGELE EVSDLLQSVD GAVDVKCLPR SKSDEVDEDM YLAIAHQNYK AAKYKQALEY
0101: GNAVYERNPR RKDNLLLLGA IYYQLHDYDM CIARNEEALG IDPHFSECYG NMANAWKEKG NVDLAIRYYL TAIEIQPNFC DAWSNLASAY MQKGRLNEAA
0201: QCCRQALALN PFLVDAHSNL GNLMKAQGFV QEAYKCYLEA LRIQPTFAIA WSNLAGLFME AGDLSKALMY YKEAIKLKPS FADAYLNQGN VYKAMGMLQE
0301: AIMCYRHAVQ ARPNYAMAYG NLASTFYEQG QLDLAIHHYN QAITCDPRFV EAYNNLGNAL KDSGRVEEAI NCYRSCLALQ SNHPQALTNL GNIYMEWNMM
0401: TAAASFYKAT LSVTTGLSAP YNNLAVIYKQ QGNYADAIAC YNEVLRIDPM AADGLVNRGN TFKEMGRVSE AIQDYIKAVV IRPTMAEAHA NLASAYKDSG
0501: HVEEALRSYK QALLLRPDFP EATCNLLHTL QCVCDWDGRD SKFVEVEGII KRQIKMSVLP SVQPFHAIAY PIDPLLALEI SRKYAAHCSL IASRYGLPAF
0601: AHPPRMPVKS EGRSGRLRVG YVSSDFGNHP LSHLMGSVFG MHNKENIEVF CYALSPNDGS EWRQRIQSEA EHFTDVSSMS SDMIGRLINE DKIQILINLN
0701: GYTKGARNEV FAMQPAPIQV SYMGFPGTTG ATYIDYLVTD EFVSPTRFSH IYSEKLVHLP HCYFVNDYKQ KNRDVLSPIC RHKRSDYGLP EDKFIFACFN
0801: QLYKMDPELF NAWCNILKRV PNSALWLLRF PAAGEMRLRA YAASKGVRPD QIIFTDIAMK NEHIRRSALA DLFLDTPLCN AHTTGTDVLW AGVPIITLPL
0901: EKMATRVAGS LCLATGVGEE MIVSSMKEYE EKAVALAQNP LKLQALTNRL KEARMTCPLF DTIRWVRNLE RAYFKMWNLY CTGQHPQHFK VTENSDEFPY
1001: DR

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.