Factsheet for VIT_14s0036g00890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0915400-00	Rice	plastid	36.67	35.26
KRH38067	Soybean	cytosol	12.67	23.75
VIT_04s0043g00760.t01	Wine grape	cytosol	89.33	13.59
Zm00001d003691_P002	Maize	cytosol	19.33	13.49
HORVU2Hr1G067320.4	Barley	cytosol	81.33	12.73
Zm00001d050343_P001	Maize	cytosol	18.67	12.73
AT3G04240.1	Thale cress	cytosol	82.67	12.69
KRG92600	Soybean	cytosol	82.67	12.55
KRH34180	Soybean	cytosol	82.67	12.55
Os02t0489550-00	Rice	endoplasmic reticulum, golgi	54.67	12.54
Bra040144.1-P	Field mustard	cytosol, mitochondrion	81.33	12.51
CDY21133	Canola	cytosol, mitochondrion	81.33	12.51
CDY29989	Canola	cytosol	81.33	12.5
Solyc09g097830.2.1	Tomato	cytosol	82.0	12.49
TraesCS2A01G275800.1	Wheat	cytosol	81.33	12.37
TraesCS2B01G293500.1	Wheat	cytosol	80.67	12.27
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	80.67	12.27
PGSC0003DMT400040741	Potato	cytosol	80.0	12.26
GSMUA_Achr3P17280_001	Banana	cytosol	80.67	12.08
OQU84950	Sorghum	cytosol	81.33	12.07
Zm00001d016506_P003	Maize	cytosol	82.67	11.78
GSMUA_Achr1P17080_001	Banana	cytosol	80.0	10.91
VIT_08s0007g02910.t01	Wine grape	cytosol	28.67	4.7
Zm00001d031337_P001	Maize	cytosol	2.67	3.25
Zm00001d015678_P001	Maize	extracellular	1.33	1.32
VIT_18s0001g13570.t01	Wine grape	cytosol	6.0	1.13

Protein Annotations

ArrayExpress:VIT_14s0036g00890	EMBL:FN595241	EnsemblPlants:VIT_14s0036g00890.t01	EnsemblPlantsGene:VIT_14s0036g00890	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:OGT/SEC/SPY_C	InterPro:TPR-like_helical_dom_sf
KEGG:00514+2.4.1.255	PANTHER:PTHR44998	PFAM:PF13844	ProteinID:CCB47638	ProteinID:CCB47638.1	SUPFAM:SSF48452
UniParc:UPI0002108CF6	UniProt:F6H5Z9	MapMan:18.1.2.2.2	:	:	:

Description

No Description!

Coordinates

chr14:-:11170174..11170958

Molecular Weight (calculated)

17374.9 Da

IEP (calculated)

7.863

GRAVY (calculated)

-0.276

Length

150 amino acids

Sequence
(BLAST)

001: MSSKMTAKLI NEDKIQILIN LNGYTKGARN EIFAIQPAPI QVSYMGFPGT TGASYIDYLV TDEFVSPLCY AHIYLEKLVH IPHYYFVNDY KQKNRDVLDP
101: NCQHKRSDYG MSEDKFIFAC FNQLYKVDPE IFNTWCNILK RVPKQCSLAP

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.