Factsheet for Bra040144.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21133	Canola	cytosol, mitochondrion	99.69	99.69
CDY29989	Canola	cytosol	98.97	98.87
AT3G04240.1	Thale cress	cytosol	94.15	93.96
VIT_14s0036g00890.t01	Wine grape	cytosol	12.51	81.33
KRG92600	Soybean	cytosol	80.92	79.86
KRH34180	Soybean	cytosol	80.92	79.86
VIT_04s0043g00760.t01	Wine grape	cytosol	79.38	78.5
PGSC0003DMT400040741	Potato	cytosol	76.51	76.2
Solyc09g097830.2.1	Tomato	cytosol	76.51	75.74
Os01t0915400-00	Rice	plastid	12.1	75.64
HORVU2Hr1G067320.4	Barley	cytosol	74.15	75.47
GSMUA_Achr3P17280_001	Banana	cytosol	76.41	74.35
TraesCS2B01G293500.1	Wheat	cytosol	74.36	73.53
TraesCS2A01G275800.1	Wheat	cytosol	74.36	73.53
TraesCS2D01G274800.1	Wheat	endoplasmic reticulum	74.26	73.43
KRH38067	Soybean	cytosol	5.95	72.5
OQU84950	Sorghum	cytosol	74.87	72.21
Zm00001d016506_P003	Maize	cytosol	74.97	69.42
Os02t0489550-00	Rice	endoplasmic reticulum, golgi	45.95	68.5
Zm00001d031337_P001	Maize	cytosol	8.62	68.29
Zm00001d015678_P001	Maize	extracellular	10.56	67.76
GSMUA_Achr1P17080_001	Banana	cytosol	76.41	67.73
Zm00001d050343_P001	Maize	cytosol	12.21	54.09
Zm00001d003691_P002	Maize	cytosol	9.13	41.4
Bra034832.1-P	Field mustard	cytosol	22.97	24.51
Bra001408.1-P	Field mustard	cytosol	20.82	22.56
Bra015393.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	7.69	9.25

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	MapMan:18.1.2.2.2	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000	EnsemblPlantsGene:Bra040144
EnsemblPlants:Bra040144.1	EnsemblPlants:Bra040144.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0006493	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M4FGB6	InterPro:OGT/SEC/SPY_C	PFAM:PF00515	PFAM:PF13176	PFAM:PF13181	PFAM:PF13414
PFAM:PF13844	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44998	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000254507E	SEG:seg

Description

AT3G04240 (E=0.0) SEC | SEC (secret agent); transferase, transferring glycosyl groups

Coordinates

chrA01:+:28472610..28478184

Molecular Weight (calculated)

110083.0 Da

IEP (calculated)

7.364

GRAVY (calculated)

-0.239

Length

975 amino acids

Sequence
(BLAST)

001: MLSSRNGAGM MISRPVFLDE VFTRKLDLSS TSSSSSSLLL NQFNKSHEAD DDARLTLAHQ LYKAGDFKQA LEHSNLVYQR NPLRTDNLLL IGAIYYQLQD
101: YDMCIARNEE ALRIQPQFAE CYGNMANAWK EKGDTDRAIR YYLIAIELKP NYADAWSNLA SAYMRKGRLS EATQCCQQAL SLNPLLVDAH SNLGNLMKAQ
201: GLIQEAYSCY LEAVRIQPTF AIAWSNLAGL FMESGDLNRA LQYYKEAVKL KPAFPDAYFN LGNVYKALGR PTEAIMCYQH AIQARPSFAM AFGNIATIYY
301: EQGQLDLAIR HYKQAISRDP RFLEAYNNLG NALKDIGRVE EAVRCYNHCL HLQPNHPQAM ANLGNIYMEW NMMGPASSLF QATLTVTTGL SAPFNNLALI
401: YKQQGNYTNA ISCYNEVLRI DPLAADALVN RGNTFKEIGR VTEAIQDYMH AITFRPTMAE AHANLASAYK DSGHVEAAIT SYKQALLLRP DFPEATCNLL
501: HTLQCVCCWE DRSKMFTEVE GIIRRQINMS VLPSVQPFHA IAYPIDPILA LEISRKYAAH CSIIASRFGL PPFNHPAGVP VKREGGFKRL RIGYMSSDFG
601: NHPLSHLMGS VFGMHNRDNV EVFCYALSPN DGTEWRQRTQ SEAEHFLDVS AMSSDAIAKT INEDKIQILI NLNGYTKGAR NEIFAMQPAP IQVSYMGFPG
701: TTGATYIDYL VTDEFVSPLQ YAHIYSEKLV HLPHCYFVND YKQKNQDVLD PKSKPKRSDY GLPEDKFIFG CFNQLYKMDP EIVNTWCNVL KRVPNSALWL
801: LRFPAAGEMR FRAYAAAQGV HPDQIIFTDV AMKNEHIRRS VLADVILDTP LCNGHTTGTD VLWAGVPMIT LPLEKMATRV AGSLCLATGL GHEMIVNSLE
901: EYEEKAVSLA LNKPKLQALT KELRASRLTC PLFDTMRWVK NLERSYFKMW NLHCSGQKPQ HFKVVEKDME FPHDR

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.