Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr10P... | |
| GSMUA_Achr10P... | |
| GSMUA_Achr7P09770_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g02910.t01 | Wine grape | cytosol | 79.3 | 79.65 |
| KRH72262 | Soybean | cytosol | 77.23 | 76.4 |
| EES14080 | Sorghum | cytosol | 76.03 | 76.28 |
| Zm00001d031938_P001 | Maize | plastid | 75.05 | 75.63 |
| AT3G11540.1 | Thale cress | cytosol | 75.27 | 75.6 |
| CDY08515 | Canola | cytosol | 74.18 | 75.0 |
| Os08t0559300-01 | Rice | cytosol | 75.6 | 74.87 |
| Solyc09g010180.2.1 | Tomato | extracellular | 75.82 | 74.76 |
| PGSC0003DMT400023083 | Potato | cytosol | 75.82 | 74.76 |
| KRH67954 | Soybean | cytosol | 74.62 | 74.54 |
| Bra034832.1-P | Field mustard | cytosol | 74.18 | 74.51 |
| CDY01033 | Canola | cytosol | 73.86 | 74.18 |
| TraesCS6D01G095600.1 | Wheat | cytosol | 75.6 | 73.75 |
| TraesCS6B01G136300.1 | Wheat | cytosol, plastid | 75.16 | 73.56 |
| TraesCS6A01G107700.1 | Wheat | cytosol | 74.95 | 73.04 |
| KRH32780 | Soybean | cytosol | 76.58 | 73.0 |
| HORVU6Hr1G019280.3 | Barley | cytosol | 75.71 | 71.8 |
| KRG96211 | Soybean | plastid | 74.73 | 70.65 |
| KRH38138 | Soybean | cytosol | 14.38 | 69.84 |
| CDX73870 | Canola | cytosol | 65.47 | 66.78 |
| Bra001408.1-P | Field mustard | cytosol | 65.47 | 66.78 |
| CDY00739 | Canola | cytosol | 73.53 | 63.14 |
| GSMUA_Achr3P17280_001 | Banana | cytosol | 25.27 | 23.15 |
| GSMUA_Achr1P17080_001 | Banana | cytosol | 24.84 | 20.73 |
| GSMUA_Achr10P... | Banana | plasma membrane | 7.19 | 7.33 |
Protein Annotations
| KEGG:00514+2.4.1.255 | Gene3D:1.25.40.10 | MapMan:18.1.2.2.1 | Gene3D:3.40.50.11380 | Gene3D:3.40.50.2000 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009938 | GO:GO:0009987 | GO:GO:2000377 | EnsemblPlantsGene:GSMUA_Achr3G22610_001 |
| EnsemblPlants:GSMUA_Achr3P22610_001 | EnsemblPlants:GSMUA_Achr3T22610_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M0SGX7 |
| InterPro:OGT/SEC/SPY_C | PFAM:PF00515 | PFAM:PF13181 | PFAM:PF13844 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR44835 | SMART:SM00028 | SMART:SM00671 | SUPFAM:SSF48452 | InterPro:Sel1-like | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | UniParc:UPI00029552EC | SEG:seg | : |
Description
Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:GMGC_GENE;Acc:GSMUA_Achr3G22610_001]
Coordinates
chr3:-:23520127..23535384
Molecular Weight (calculated)
102655.0 Da
IEP (calculated)
6.270
GRAVY (calculated)
-0.216
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTEETSNG KKRDSTQLEN ENPKEFRSIS DVCPVQSQVP LLKKKFEGKD GLAYANILRS RNKFADAQVL YENIIENDST NVEALIGKGI CLQMQNHLRQ
101: AFACFVESIR LDPQNACALT HCGVIYKDEG HLLEAAESYQ KALKADPSYK LAAECLAIVL TDLGTSLKLA GNTDEGIQKY FDALKVDGHY APAYYNLGVV
201: YSEMMQYDLA LGCYEKAVVE RPLYAEAYCN MGVIYKNRGD LEAAIACYER CLTVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGVAYYK KALYYNWHYA
301: DAMYNLGVAY GEMLKFDMAI VFYELALHFN PHCAEACNNL GVIYKDRDNL DKAVECYQMA LSIKPNFSQS LNNLGVVFTV QGKMDAAASM IEKAIIANPT
401: YAEAYNNLGV LYRDVGNISL AIEAYERCLQ IDPDSRNAGQ NRLLAMNYID EGLDDRLFEA HREWGRRFMN LYPQYTSWDN PKDMERPLVV GYVSPDYFTH
501: SVSYFIEAPL SHHNYANYKV VVYSAVVKAD AKTLKFKDRV LKKGGLWRDI YGVDERKVAS MVRDDKIDIL VELTGHTANN KLGMMACRPA PVQVTWIGYP
601: NTTGLPTIDY RMTDGLVDPP NTRQKNVEEL VRLPECFLCY TPSPEAGPVS PTPALSNGFI TFGSFNNLAK ITPNVLRVWA TILCAVPNSR LVVKCKPFCC
701: DSVRQRFLST LEQMGLESLR VDLLPLILFN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMAG SVHAHNVGVS LLTKVGLGRL VAKTEEEYVK
801: LALQLASDVS ALGELRMTLR ELMSKSPVCD GAKFTQGLES TYRNMWHRYC RGDVPATRHI ESLKDQPPLS DKILVRFSEH KTSNVPEQNH QVQTKMNGVT
901: PNLSLTPNNA SCEANGNC
101: AFACFVESIR LDPQNACALT HCGVIYKDEG HLLEAAESYQ KALKADPSYK LAAECLAIVL TDLGTSLKLA GNTDEGIQKY FDALKVDGHY APAYYNLGVV
201: YSEMMQYDLA LGCYEKAVVE RPLYAEAYCN MGVIYKNRGD LEAAIACYER CLTVSPNFEI AKNNMAIALT DLGTKVKLEG DINQGVAYYK KALYYNWHYA
301: DAMYNLGVAY GEMLKFDMAI VFYELALHFN PHCAEACNNL GVIYKDRDNL DKAVECYQMA LSIKPNFSQS LNNLGVVFTV QGKMDAAASM IEKAIIANPT
401: YAEAYNNLGV LYRDVGNISL AIEAYERCLQ IDPDSRNAGQ NRLLAMNYID EGLDDRLFEA HREWGRRFMN LYPQYTSWDN PKDMERPLVV GYVSPDYFTH
501: SVSYFIEAPL SHHNYANYKV VVYSAVVKAD AKTLKFKDRV LKKGGLWRDI YGVDERKVAS MVRDDKIDIL VELTGHTANN KLGMMACRPA PVQVTWIGYP
601: NTTGLPTIDY RMTDGLVDPP NTRQKNVEEL VRLPECFLCY TPSPEAGPVS PTPALSNGFI TFGSFNNLAK ITPNVLRVWA TILCAVPNSR LVVKCKPFCC
701: DSVRQRFLST LEQMGLESLR VDLLPLILFN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMAG SVHAHNVGVS LLTKVGLGRL VAKTEEEYVK
801: LALQLASDVS ALGELRMTLR ELMSKSPVCD GAKFTQGLES TYRNMWHRYC RGDVPATRHI ESLKDQPPLS DKILVRFSEH KTSNVPEQNH QVQTKMNGVT
901: PNLSLTPNNA SCEANGNC
001: MVGLEDDTER ERSPVVENGF SNGSRSSSSS AGVLSPSRKV TQGNDTLSYA NILRARNKFA DALALYEAML EKDSKNVEAH IGKGICLQTQ NKGNLAFDCF
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
Arabidopsis Description
SPYProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:UniProtKB/Swiss-Prot;Acc:Q96301]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.