CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
nucleus 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67954	Soybean	cytosol	89.6	94.67
KRH72262	Soybean	cytosol	81.26	85.02
KRH32780	Soybean	cytosol	80.33	81.0
VIT_08s0007g02910.t01	Wine grape	cytosol	75.8	80.53
Solyc09g010180.2.1	Tomato	extracellular	74.87	78.09
PGSC0003DMT400023083	Potato	cytosol	74.87	78.09
GSMUA_Achr3P22610_001	Banana	cytosol	70.65	74.73
EES14080	Sorghum	cytosol	69.41	73.66
Zm00001d031938_P001	Maize	plastid	69.1	73.66
Os08t0559300-01	Rice	cytosol	68.8	72.06
KRH38138	Soybean	cytosol	14.01	71.96
TraesCS6B01G136300.1	Wheat	cytosol, plastid	69.21	71.64
TraesCS6D01G095600.1	Wheat	cytosol	69.31	71.52
TraesCS6A01G107700.1	Wheat	cytosol	69.0	71.13
HORVU6Hr1G019280.3	Barley	cytosol	69.41	69.63
KRH34180	Soybean	cytosol	23.48	23.08
KRG92600	Soybean	cytosol	23.48	23.08
KRH38067	Soybean	cytosol	1.75	21.25
KRG90336	Soybean	nucleus	7.0	8.48
KRH33574	Soybean	cytosol	6.9	8.35

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	EntrezGene:100779014	MapMan:18.1.2.2.1	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000
EMBL:ACUP02012147	EnsemblPlantsGene:GLYMA_19G196000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:K7MZ97	EnsemblPlants:KRG96211	ProteinID:KRG96211	ProteinID:KRG96211.1
InterPro:OGT/SEC/SPY_C	PFAM:PF00515	PFAM:PF13374	PFAM:PF13432	PFAM:PF13844	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR44835	SMART:SM00028	SMART:SM00671	SUPFAM:SSF48452	InterPro:Sel1-like
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0002969979	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:45316087..45333596

Molecular Weight (calculated)

108171.0 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.177

Length

971 amino acids

Sequence
(BLAST)

001: MLCYSYSFTL LPHSNFQNPN FFLEIFSSLP RFHFHCFFLR LVASIANSVT FFVQMAGADN GDGNGSEREL AGNSDNGSVE VAEASVSDSG CEGNDSVSYA
101: NVLRSRNKFV DALAIYERVL ESDGANVEAL IGKGICLQMQ NKGRLAYESF SEAIKVDPQN ACALTHCGIL HKDEGRLVEA AESYQKALQV DPSYKAAAEC
201: LAIVLTDIGT NIKLAGNTQD GIQKYFEALK VDPHYAPAYY NLGVVYSEMM QYDTALSFYE KAASERPVYA EAYCNMGVIF KNRGDLESAI TCYERCLTVS
301: PNFEIAKNNM AIALTDLGTK VKLEGDINQG VTLYKKALYY NWHYADAMYN LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVIYK DRENLDKAVE
401: CYQLALSIKP NFSQSLNNLG VVYTVQGKVD AAASMIEKAI IANPTYAEAY NNLGVLYRDA GDIARAINAY EQCLKIDPDS RNAGQNRLLA MNYIEEGHDD
501: TLFEVHRDWG RRFMRLYSQY TSWDNSKDPE RPLVIGYVSP DYFTHSVSYF IEAPLVYHDY SNFKVIVYSA VVKADSKTIR FREKVVNKGG IWKDIYGIDE
601: KMVANMVRED QVDILVELTG HTANNKLGMM ACRPAPIQVT WIGYPNTTGL PTIDYRITDS LADPPETKQK HVEELVRLPE CFLCYTPSLE AGPVCPTPAL
701: SNGFVTFGSF NNLAKITPKV LQVWVRILCA IPNSRLVVKC KPFCSDSVRQ IFLSTLEQLG LEPLRVDLLP LILLNHDHMQ AYSLMDISLD TFPYAGTTTT
801: CESLYMGVPC VTMAGSVHAH NVGVSLLSKV GLEHLIARNE DEYVELAQQL ASDISALQNL RMSLRNLMSK SPLCDGAKFI LGLESTYRNM WHRYCRGDVP
901: SLKRMELLQV ATGDLSNKNS EPTRIANSRE DSPGSVKANG FKTRPVSKLN IHSCEENDGS SNHSSKQGKT S

Best Arabidopsis Sequence Match ( AT3G04240.1 )
(BLAST)

001: MISSKNGAAM ISRPVFLSDR VDEVFSRKLD LSVSSSSSSS LLQQFNKTHE GDDDARLALA HQLYKGGDFK QALEHSNMVY QRNPLRTDNL LLIGAIYYQL
101: QEYDMCIARN EEALRIQPQF AECYGNMANA WKEKGDTDRA IRYYLIAIEL RPNFADAWSN LASAYMRKGR LSEATQCCQQ ALSLNPLLVD AHSNLGNLMK
201: AQGLIHEAYS CYLEAVRIQP TFAIAWSNLA GLFMESGDLN RALQYYKEAV KLKPAFPDAY LNLGNVYKAL GRPTEAIMCY QHALQMRPNS AMAFGNIASI
301: YYEQGQLDLA IRHYKQALSR DPRFLEAYNN LGNALKDIGR VDEAVRCYNQ CLALQPNHPQ AMANLGNIYM EWNMMGPASS LFKATLAVTT GLSAPFNNLA
401: IIYKQQGNYS DAISCYNEVL RIDPLAADAL VNRGNTYKEI GRVTEAIQDY MHAINFRPTM AEAHANLASA YKDSGHVEAA ITSYKQALLL RPDFPEATCN
501: LLHTLQCVCC WEDRSKMFAE VESIIRRQIN MSVLPSVQPF HAIAYPIDPI LALEISRKYA AHCSIIASRF GLPPFTHPAG LPVKREGGFK RLRIGYVSSD
601: FGNHPLSHLM GSVFGMHNRE NVEVFCYALS ANDNTEWRQR IQSEAEHFLD VSAMSSDAIA KIINQDKIQI LINLNGYTKG ARNEIFAMQP APIQVSYMGF
701: PGTTGATYID YLVTDEFVSP LQYAHIYSEK LVHLPHCYFV NDYKQKNQDV LDPNSKPKRS DYGLPEDKFI FACFNQLYKM DPEIVNTWCN ILKRVPNSAL
801: WLLRFPAAGE MRFRTYAAAQ GVQPDQIIFT DVAMKSEHIR RSVLADVILD TPLCNGHTTG TDVLWAGVPM ITLPLEKMAT RVAGSLCLAT GLGHGMIVNS
901: LEEYEEKAVS LALNKPKLQA LTKELRASRL TCPLFDTMRW VKNLERSYFK MWNLHCSGQQ PQHFKVLEND LEFPHDR

Arabidopsis Description

SECProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.