Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G021140.2 | |
| HORVU3Hr1G021150.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G11540.1 | HORVU3Hr1G021140.2 | AT1G22770.1 | 15155885 |
| AT3G11540.1 | HORVU3Hr1G021150.2 | AT1G22770.1 | 15155885 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G095600.1 | Wheat | cytosol | 84.71 | 87.14 |
| TraesCS6B01G136300.1 | Wheat | cytosol, plastid | 83.88 | 86.57 |
| TraesCS6A01G107700.1 | Wheat | cytosol | 83.99 | 86.31 |
| Zm00001d031938_P001 | Maize | plastid | 76.96 | 81.78 |
| Os08t0559300-01 | Rice | cytosol | 78.31 | 81.77 |
| EES14080 | Sorghum | cytosol | 77.27 | 81.75 |
| GSMUA_Achr3P22610_001 | Banana | cytosol | 71.8 | 75.71 |
| VIT_08s0007g02910.t01 | Wine grape | cytosol | 70.66 | 74.84 |
| CDY08515 | Canola | cytosol | 69.94 | 74.56 |
| AT3G11540.1 | Thale cress | cytosol | 70.35 | 74.51 |
| CDY01033 | Canola | cytosol | 70.04 | 74.18 |
| Bra034832.1-P | Field mustard | cytosol | 69.94 | 74.07 |
| KRH67954 | Soybean | cytosol | 69.73 | 73.45 |
| PGSC0003DMT400023083 | Potato | cytosol | 70.25 | 73.04 |
| KRH72262 | Soybean | cytosol | 69.83 | 72.84 |
| Solyc09g010180.2.1 | Tomato | extracellular | 70.04 | 72.82 |
| KRH32780 | Soybean | cytosol | 69.52 | 69.89 |
| KRG96211 | Soybean | plastid | 69.63 | 69.41 |
| KRH38138 | Soybean | cytosol | 13.43 | 68.78 |
| CDX73870 | Canola | cytosol | 61.67 | 66.33 |
| Bra001408.1-P | Field mustard | cytosol | 61.67 | 66.33 |
| CDY00739 | Canola | cytosol | 68.91 | 62.39 |
| HORVU2Hr1G067320.4 | Barley | cytosol | 22.31 | 22.55 |
| HORVU4Hr1G061170.3 | Barley | cytosol, mitochondrion, nucleus | 7.44 | 8.54 |
Protein Annotations
| KEGG:00514+2.4.1.255 | Gene3D:1.25.40.10 | MapMan:18.1.2.2.1 | Gene3D:3.40.50.11380 | Gene3D:3.40.50.2000 | UniProt:A0A287THT7 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU6Hr1G019280 | EnsemblPlants:HORVU6Hr1G019280.3 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:OGT/SEC/SPY_C | PFAM:PF00515 | PFAM:PF13181 |
| PFAM:PF13374 | PFAM:PF13432 | PFAM:PF13844 | PFscan:PS50005 | PFscan:PS50293 | SMART:SM00028 |
| SMART:SM00671 | SUPFAM:SSF48452 | InterPro:Sel1-like | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 |
| InterPro:TPR_repeat | UniParc:UPI000B484CB7 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:51404169..51411556
Molecular Weight (calculated)
106750.0 Da
IEP (calculated)
6.141
GRAVY (calculated)
-0.192
Length
968 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLQGKESN GAVPVCNGGG GAAAPPAKQQ LPEGTDALRY ANILRSRNKF ADALQLYTTV LDKDGANVEA LIGKGICLQA QSLPRQALDC FTEAVKVDPK
101: NACALTHCGM IYKDEGHLVE AAEAYQKARS ADPSYKAASE FLAIVLTDLG TSLKLAGNTE DGIQKYCEAL EVDSHYAPAY YNLGVVYSEM MQFDVALTCY
201: EKAALERPLY AEAYCNMGVI YKNRGELDAA IACYDRCLTI SPNFEIAKNN MAIALTDLGT KVKIEGDINQ GVAYYKKALF YNWHYADAMY NLGVAYGEML
301: NFEMAIVFYE LALHFNPRCA EACNNLGVIY KDRDNLDKAV ECYQMALSIK PNFSQSLNNL GVVYTVQGKM DAAASMIEKA ILANPTYAEA YNNLGVLYRD
401: AGSITLSVQA YERCLQIDPD SRNAGQNRLL AMNYIDEGSD DKLYDAHREW GKRFMKLYAQ YTSWDNPKVA DRPLVIGYVS PDFFTHSVSY FVEAPLTHHD
501: YTKCKVVVYS GVVKADAKTL RFKDKVLKKG GVWRDIYGID EKKVATLVRE DKVDILVELT GHTANNKLGT MACRPAPIQV TWIGYPNTTG LPAIDYRITD
601: SLADSPNTNQ KHVEELVRLP ESFLCYTPSP EAGPVCPTPA ISNGFITFGS FNNLAKVHNR FVLFILSVLN HSVHKVNFWQ ITPKVMQVWA RILCAVPNSR
701: LVVKCKPFCC DSIRQKFLST LEELGLESLR VDLLPLIHLN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMAG SVHAHNVGVS LLTKVGLGRL
801: VAKTEDEYVS LALDLASDVS ALEELRKSLR ELMIKSPVCD GESFTRGLES AYRSMWHRYC DGDSPALRRL EVLADQTGED LNKTAVKLAD LKAQRVNATA
901: EEDNQSPVTK FDATSKGGEQ PQPQIMVNGV TSPEGNQAVK AQPQIMVNGV SSPHSPSGRC EANGHSSR
101: NACALTHCGM IYKDEGHLVE AAEAYQKARS ADPSYKAASE FLAIVLTDLG TSLKLAGNTE DGIQKYCEAL EVDSHYAPAY YNLGVVYSEM MQFDVALTCY
201: EKAALERPLY AEAYCNMGVI YKNRGELDAA IACYDRCLTI SPNFEIAKNN MAIALTDLGT KVKIEGDINQ GVAYYKKALF YNWHYADAMY NLGVAYGEML
301: NFEMAIVFYE LALHFNPRCA EACNNLGVIY KDRDNLDKAV ECYQMALSIK PNFSQSLNNL GVVYTVQGKM DAAASMIEKA ILANPTYAEA YNNLGVLYRD
401: AGSITLSVQA YERCLQIDPD SRNAGQNRLL AMNYIDEGSD DKLYDAHREW GKRFMKLYAQ YTSWDNPKVA DRPLVIGYVS PDFFTHSVSY FVEAPLTHHD
501: YTKCKVVVYS GVVKADAKTL RFKDKVLKKG GVWRDIYGID EKKVATLVRE DKVDILVELT GHTANNKLGT MACRPAPIQV TWIGYPNTTG LPAIDYRITD
601: SLADSPNTNQ KHVEELVRLP ESFLCYTPSP EAGPVCPTPA ISNGFITFGS FNNLAKVHNR FVLFILSVLN HSVHKVNFWQ ITPKVMQVWA RILCAVPNSR
701: LVVKCKPFCC DSIRQKFLST LEELGLESLR VDLLPLIHLN HDHMQAYSLM DISLDTFPYA GTTTTCESLY MGVPCVTMAG SVHAHNVGVS LLTKVGLGRL
801: VAKTEDEYVS LALDLASDVS ALEELRKSLR ELMIKSPVCD GESFTRGLES AYRSMWHRYC DGDSPALRRL EVLADQTGED LNKTAVKLAD LKAQRVNATA
901: EEDNQSPVTK FDATSKGGEQ PQPQIMVNGV TSPEGNQAVK AQPQIMVNGV SSPHSPSGRC EANGHSSR
001: MVGLEDDTER ERSPVVENGF SNGSRSSSSS AGVLSPSRKV TQGNDTLSYA NILRARNKFA DALALYEAML EKDSKNVEAH IGKGICLQTQ NKGNLAFDCF
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS
Arabidopsis Description
SPYProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:UniProtKB/Swiss-Prot;Acc:Q96301]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.