CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32780	Soybean	cytosol	96.12	92.63
KRH67954	Soybean	cytosol	84.7	85.53
VIT_08s0007g02910.t01	Wine grape	cytosol	83.08	84.35
KRG96211	Soybean	plastid	85.02	81.26
Solyc09g010180.2.1	Tomato	extracellular	81.14	80.88
PGSC0003DMT400023083	Potato	cytosol	81.14	80.88
GSMUA_Achr3P22610_001	Banana	cytosol	76.4	77.23
Zm00001d031938_P001	Maize	plastid	73.81	75.19
EES14080	Sorghum	cytosol	74.14	75.19
KRH38138	Soybean	cytosol	15.3	75.13
Os08t0559300-01	Rice	cytosol	73.49	73.57
TraesCS6B01G136300.1	Wheat	cytosol, plastid	73.06	72.28
TraesCS6D01G095600.1	Wheat	cytosol	73.17	72.16
TraesCS6A01G107700.1	Wheat	cytosol	72.84	71.76
HORVU6Hr1G019280.3	Barley	cytosol	72.84	69.83
KRH34180	Soybean	cytosol	25.0	23.48
KRG92600	Soybean	cytosol	25.0	23.48
KRH38067	Soybean	cytosol	1.72	20.0
KRG90336	Soybean	nucleus	7.54	8.73
KRH33574	Soybean	cytosol	7.44	8.6

Protein Annotations

KEGG:00514+2.4.1.255	Gene3D:1.25.40.10	EntrezGene:100776844	MapMan:18.1.2.2.1	Gene3D:3.40.50.11380	Gene3D:3.40.50.2000
EMBL:ACUP02001197	EnsemblPlantsGene:GLYMA_02G201300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1JGL8
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EMBL:JN714554	ProteinID:KRH72261.1	EnsemblPlants:KRH72262
ProteinID:KRH72262	ProteinID:KRH72262.1	ProteinID:KRH72263.1	InterPro:OGT/SEC/SPY_C	PFAM:PF00515	PFAM:PF13181
PFAM:PF13424	PFAM:PF13432	PFAM:PF13844	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44835
SMART:SM00028	SMART:SM00671	SUPFAM:SSF48452	InterPro:Sel1-like	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000233745F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:38506022..38523460

Molecular Weight (calculated)

102900.0 Da

IEP (calculated)

5.914

GRAVY (calculated)

-0.244

Length

928 amino acids

Sequence
(BLAST)

001: MAWTEDSDGN NGREKLVGEN GFLKVSEPSS DGSVGDGGSV SKRCEGKDDV SYANILRSRN KFVDALALYE RVLESDGGNV EALIGKGICL QMQNMGRLAF
101: ESFAEAIRLD PQNACALTHC GILYKDEGRL VEAAESYQKA LQVDPSYKAA AECLAIVLTD IGTNIKLAGN TQEGIQKYFE ALKIDPHYAP AYYNLGVVYS
201: EMMQYDMALT FYEKAASERP MYAEAYCNMG VIYKNRGDLE AAITCYERCL AVSPNFEIAK NNMAIALTDL GTKVKLEGDI DHGVAFYKKA LYYNWHYADA
301: MYNLGVAYGE MLKFDMAIVF YELAFHFNPH CAEACNNLGV IYKDRDNLDK AVECYQLALG IKPNFSQSLN NLGVVYTVQG KMDAAASMIE KAIIANPTYA
401: EAYNNLGVLY RDAGDIALAI NAYEQCLKID PDSRNAGQNR LLAMNYIDEG NDDKLFEAHR DWGRRFMRLY SQFTSWDNSK DPERPLVIGY VSPDYFTHSV
501: SYFIEAPLLY HDYTNYKVVV YSAVVKADAK TIRFREKVLK KGGIWKDIYG TDEKKVADMV REDQVDILIE LTGHTANNKL GMMACRPAPV QVTWIGYPNT
601: TGLPTIDYRI TDSQADPPET KQKHVEELVR LPDCFLCYTP SPEAGPVCPT PALSNGFVTF GSFNNLAKIT PKVLQVWAKI LCAIPNSRLV VKCKPFCCDS
701: VRQRFLSTLE KLGLEPLRVD LLPLILLNHD HMQAYSLMDI SLDTFPYAGT TTTCESLYMG VPCVTMAGSV HAHNVGVSLL SKVGLGNLIA KNEDEYVKLA
801: VKLASDISAL QNLRMSLREL MSKSPLCNGA KFTLGLESTY RKMWRRYCKG DVPALKRMEL LQQPVSSNDP SNKNSEPTRA TNSSEGSPGS VKANGFSSTQ
901: PPKLNFVNCE ENGGSLNHSS KQGMVGSS

Best Arabidopsis Sequence Match ( AT3G11540.1 )
(BLAST)

001: MVGLEDDTER ERSPVVENGF SNGSRSSSSS AGVLSPSRKV TQGNDTLSYA NILRARNKFA DALALYEAML EKDSKNVEAH IGKGICLQTQ NKGNLAFDCF
101: SEAIRLDPHN ACALTHCGIL HKEEGRLVEA AESYQKALMA DASYKPAAEC LAIVLTDLGT SLKLAGNTQE GIQKYYEALK IDPHYAPAYY NLGVVYSEMM
201: QYDNALSCYE KAALERPMYA EAYCNMGVIY KNRGDLEMAI TCYERCLAVS PNFEIAKNNM AIALTDLGTK VKLEGDVTQG VAYYKKALYY NWHYADAMYN
301: LGVAYGEMLK FDMAIVFYEL AFHFNPHCAE ACNNLGVLYK DRDNLDKAVE CYQMALSIKP NFAQSLNNLG VVYTVQGKMD AAASMIEKAI LANPTYAEAF
401: NNLGVLYRDA GNITMAIDAY EECLKIDPDS RNAGQNRLLA MNYINEGLDD KLFEAHRDWG WRFTRLHPQY TSWDNLKDPE RPITIGYISP DFFTHSVSYF
501: IEAPLTHHDY TKYKVVVYSA VVKADAKTYR FRDKVLKKGG VWKDIYGIDE KKIASMVRED KIDILVELTG HTANNKLGTM ACRPAPVQVT WIGYPNTTGL
601: PTVDYRITDS LADPPDTKQK QVEELVRLPD CFLCYTPSPE AGPVCPTPAL SNGFVTFGSF NNLAKITPKV LQVWARILCA VPNSRLVVKC KPFCCDSIRQ
701: RFLTTLEQLG LESKRVDLLP LILFNHDHMQ AYSLMDISLD TFPYAGTTTT CESLYMGVPC VTMAGSVHAH NVGVSLLTKV GLGHLVAKNE DEYVQLSVDL
801: ASDVTALSKL RMSLRDLMAG SPVCNGPSFA VGLESAYRNM WKKYCKGEVP SLRRMEMLQK EVHDDPLISK DLGPSRVSVT GEATPSLKAN GSAPVPSSLP
901: TQSPQLSKRM DSTS

Arabidopsis Description

SPYProbable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Source:UniProtKB/Swiss-Prot;Acc:Q96301]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.