CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90336	Soybean	nucleus	93.77	93.77
VIT_18s0001g13570.t01	Wine grape	cytosol	80.05	80.35
CDY46833	Canola	cytosol, mitochondrion, nucleus, plastid	77.31	76.73
AT1G05150.1	Thale cress	cytosol	77.18	76.61
AT2G32450.1	Thale cress	cytosol	76.56	76.56
Solyc04g081050.1.1	Tomato	cytosol	76.56	76.56
Bra015393.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	77.18	76.33
PGSC0003DMT400009639	Potato	cytosol	72.94	68.82
HORVU4Hr1G061170.3	Barley	cytosol, mitochondrion, nucleus	67.08	63.82
EER95134	Sorghum	mitochondrion	66.83	63.58
TraesCS4D01G215500.1	Wheat	mitochondrion	66.71	63.54
Zm00001d028533_P001	Maize	mitochondrion	66.46	63.45
Zm00001d047855_P001	Maize	mitochondrion	66.58	63.35
Os03t0263900-01	Rice	plasma membrane	66.96	63.33
TraesCS4A01G089400.1	Wheat	mitochondrion	66.33	63.18
TraesCS4B01G215000.1	Wheat	cytosol, mitochondrion	66.33	63.18
GSMUA_Achr10P...	Banana	plasma membrane	68.45	61.0
CDY55452	Canola	cytosol	15.21	54.95
Zm00001d044204_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	31.17	46.38
KRH38067	Soybean	cytosol	1.0	10.0
KRG92600	Soybean	cytosol	9.98	8.1
KRH34180	Soybean	cytosol	9.73	7.89
KRH67954	Soybean	cytosol	8.6	7.51
KRH72262	Soybean	cytosol	8.6	7.44
KRH32780	Soybean	cytosol	8.48	7.06
KRG96211	Soybean	plastid	8.35	6.9
KRH38138	Soybean	cytosol	1.5	6.35

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.25.40.10	EntrezGene:100798635	MapMan:35.1	EMBL:ACUP02006533	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_10G132800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
InterPro:IPR002048	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K7LJ63	EnsemblPlants:KRH33574
ProteinID:KRH33574	ProteinID:KRH33574.1	PFAM:PF13202	PFAM:PF13432	PFscan:PS50005	PFscan:PS50222
PFscan:PS50293	PANTHER:PTHR45081	SMART:SM00028	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233C63A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:35744023..35747761

Molecular Weight (calculated)

89706.2 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.341

Length

802 amino acids

Sequence
(BLAST)

001: MATRGTRSEK VRRIFNQFDA NRDGGLNREE MASLVGAVNP RVKFSDEQIN AILDEVFRTY GEFIDGDKGL TYEGLLRTYD DGAGDVDRDF DALGLDLVAA
101: DAAKEPLAAL EASSSSIVDE RMAVETQKKQ RTAAWAVSPN HGIVFDETWK IVDDLELLVK RLKVKQSKEG GKLKNDNFDA YSDAGWSREL GPSAEISEKR
201: VMWEESGHDY AVFLKELGGL RGRADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPVDVRP HFRTGNCLYV LGRYKEAKEE FLLALESAEA
301: GGNQWAYLLP QIYVNLGIAL EGEGLVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IFMKPDYADA HCDLASALHA MGEDERAIEV
401: FQKAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLA VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKMTNRVE LHDAISHLKQ LQKKKTKPSN
501: GGASGEASFV IVEPSKFKVV GDKTTGRQEL ATALQIRALQ RVARLSRCSV ELLKKEMSER DVPVSYSGSG VPEKSIRKPS LEEILHRLLN FLKPETFQGA
601: VKAINERILS VLDENGSGRL DLGMFFAILA PICGGPPDRR KRVAFDALLW RPMNEDGANI RKFDATLYIK LLRAVYLPSQ GVSELMEVRG DSDTSMVSFS
701: EFLVMFDDPD WGFGIMPTLV KLETGDRNRH GDTVCSVCRY PIIGSRFKEI KSHFSLCNQC YSEGKVPSSF KQDEYRFKEY GSEGEAMKDK CMCFSLQFHN
801: EK

Best Arabidopsis Sequence Match ( AT1G05150.1 )
(BLAST)

001: MATRGSRSEK VKRIFQQFDG NHDGGLNREE MAALVVAVNP RVKFSDEQIN AILDEVFRTY AEFIDPNKGL TYDGLLRTYD DGAGDVDRDF DALGLELNAD
101: ETTIKGSEAA SSSSITDERA VEAQKKQRTA AWAVSPNHGI VFDETWKLVD DLEILVKRLK SKQEKDGKLK ADNNNNNVDA FSDAGWSREL GPSSEISEKR
201: IYWEESSHDY GVFVKELGVL RSKADGARSR EEAFDGHMAI GRVLYEHQLF KEALVSFKRA CELQPTDVRP HFKAGNCLYV LGKCKESKDE FLLALEAAES
301: GGNQWAYLLP QIYVNLGIAL EGEGMVLSAC EYYREAAILC PTHFRALKLL GSALFGVGEY RAAVKALEEA IYLKPDYADA HCDLASSLHS MGEDERAIEV
401: FQRAIDLKPG HVDALYNLGG LYMDLGRFQR ASEMYTRVLT VWPNHWRAQL NKAVSLLGAG ETEEAKRALK EALKLTNRVE LHDAISHLKH LQKKKGKNNG
501: NGNGGEGPFI VVEPSKFKTV GEKTTLRPDL ATALQIRAFQ RVTRLGKCDV EAVRKEMRDN DVPVSYSGSG GPTKSIRKPN LEEILRRLLS SLKPDTFQGA
601: IKAINEKILA LLDDSGSGRV DMGMFYAVIA PLCGGHSDKR KRVAFDALLW RPVNEGSSQI TKTDAVKYIK LLRAIYIPSH GMSEMLEVHG EEEAESSVTV
701: TFNQFLAMFD DPDWGFGIMS TILKLEANDR NRHGNQVCSV CRYPVIGSRF KEVKARFSLC NQCYGEGKVP PSFKQEEYKF REYESEAEAM KAKCVCFSMQ
801: SHKKAIAT

Arabidopsis Description

Uncharacterized TPR repeat-containing protein At1g05150 [Source:UniProtKB/Swiss-Prot;Acc:O23052]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.